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# Copyright 2021 Collate
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
# http://www.apache.org/licenses/LICENSE-2.0
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""
Workflow definition for the ORM Profiler.
- How to specify the source
- How to specify the entities to run
- How to define metrics & tests
"""
import itertools
from typing import Iterable, List
import click
from pydantic import ValidationError
from metadata.config.common import WorkflowExecutionError
from metadata.config.workflow import get_processor, get_sink
from metadata.generated.schema.entity.data.database import Database
from metadata.generated.schema.entity.data.table import Table
from metadata.generated.schema.entity.services.connections.metadata.openMetadataConnection import (
OpenMetadataConnection,
)
from metadata.generated.schema.metadataIngestion.databaseServiceProfilerPipeline import (
DatabaseServiceProfilerPipeline,
)
from metadata.generated.schema.metadataIngestion.workflow import (
OpenMetadataWorkflowConfig,
)
from metadata.ingestion.api.processor import Processor
from metadata.ingestion.api.sink import Sink
from metadata.ingestion.ometa.ometa_api import OpenMetadata
from metadata.ingestion.source.sql_source import SQLSourceStatus
from metadata.orm_profiler.api.models import ProfilerProcessorConfig, ProfilerResponse
from metadata.orm_profiler.utils import logger
from metadata.utils.connections import (
create_and_bind_session,
get_connection,
test_connection,
)
from metadata.utils.filters import filter_by_fqn
logger = logger()
class ProfilerWorkflow:
"""
Configure and run the ORM profiler
"""
config: OpenMetadataWorkflowConfig
processor: Processor
sink: Sink
metadata: OpenMetadata
def __init__(self, config: OpenMetadataWorkflowConfig):
self.config = config
self.metadata_config: OpenMetadataConnection = (
self.config.workflowConfig.openMetadataServerConfig
)
# Prepare the connection to the source service
# We don't need the whole Source class, as it is the OM Server
engine = get_connection(self.config.source.serviceConnection.__root__.config)
test_connection(engine)
# Init and type the source config
self.source_config: DatabaseServiceProfilerPipeline = (
self.config.source.sourceConfig.config
)
self.source_status = SQLSourceStatus()
self.processor = get_processor(
processor_type=self.config.processor.type, # orm-profiler
processor_config=self.config.processor or ProfilerProcessorConfig(),
metadata_config=self.metadata_config,
_from="orm_profiler",
# Pass the session as kwargs for the profiler
session=create_and_bind_session(engine),
)
if self.config.sink:
self.sink = get_sink(
sink_type=self.config.sink.type,
sink_config=self.config.sink,
metadata_config=self.metadata_config,
_from="orm_profiler",
)
# OpenMetadata client to fetch tables
self.metadata = OpenMetadata(self.metadata_config)
@classmethod
def create(cls, config_dict: dict) -> "ProfilerWorkflow":
"""
Parse a JSON (dict) and create the workflow
"""
try:
config = OpenMetadataWorkflowConfig.parse_obj(config_dict)
return cls(config)
except ValidationError as err:
logger.error("Error trying to parse the Profiler Workflow configuration")
raise err
def filter_entities(self, tables: List[Table]) -> Iterable[Table]:
"""
From a list of tables, apply the SQLSourceConfig
filter patterns.
We will update the status on the SQLSource Status.
"""
for table in tables:
if filter_by_fqn(
fqn_filter_pattern=self.source_config.fqnFilterPattern,
fqn=table.fullyQualifiedName.__root__,
):
self.source_status.filter(
table.fullyQualifiedName.__root__, "Schema pattern not allowed"
)
continue
2022-03-31 08:35:11 +02:00
self.source_status.scanned(table.fullyQualifiedName.__root__)
yield table
def list_entities(self) -> Iterable[Table]:
"""
List and filter OpenMetadata tables based on the
source configuration.
The listing will be based on the entities from the
informed service name in the source configuration.
Note that users can specify `table_filter_pattern` to
either be `includes` or `excludes`. This means
that we will either what is specified in `includes`
or we will use everything but the tables excluded.
Same with `schema_filter_pattern`.
"""
# First, get all the databases for the service:
all_dbs = self.metadata.list_entities(
entity=Database,
params={"service": self.config.source.serviceName},
)
# Then list all tables from each db.
# This returns a nested structure [[db1 tables], [db2 tables]...]
all_tables = [
self.metadata.list_entities(
entity=Table,
fields=[
"tableProfile",
"tests",
], # We will need it for window metrics to check past data
params={
"database": f"{self.config.source.serviceName}.{database.name.__root__}"
},
).entities
for database in all_dbs.entities
]
# Flatten the structure into a List[Table]
flat_tables = list(itertools.chain.from_iterable(all_tables))
yield from self.filter_entities(flat_tables)
def execute(self):
"""
Run the profiling and tests
"""
for entity in self.list_entities():
profile_and_tests: ProfilerResponse = self.processor.process(entity)
if hasattr(self, "sink"):
self.sink.write_record(profile_and_tests)
def print_status(self) -> int:
click.echo()
click.secho("Source Status:", bold=True)
click.echo(self.source_status.as_string())
click.secho("Processor Status:", bold=True)
click.echo(self.processor.get_status().as_string())
if hasattr(self, "sink"):
click.secho("Sink Status:", bold=True)
click.echo(self.sink.get_status().as_string())
click.echo()
if (
self.source_status.failures
or self.processor.get_status().failures
or (hasattr(self, "sink") and self.sink.get_status().failures)
):
click.secho("Workflow finished with failures", fg="bright_red", bold=True)
return 1
elif (
self.source_status.warnings
or self.processor.get_status().failures
or (hasattr(self, "sink") and self.sink.get_status().warnings)
):
click.secho("Workflow finished with warnings", fg="yellow", bold=True)
return 0
else:
click.secho("Workflow finished successfully", fg="green", bold=True)
return 0
def raise_from_status(self, raise_warnings=False):
"""
Check source, processor and sink status and raise if needed
Our profiler source will never log any failure, only filters,
as we are just picking up data from OM.
"""
if self.processor.get_status().failures:
raise WorkflowExecutionError(
"Processor reported errors", self.processor.get_status()
)
if hasattr(self, "sink") and self.sink.get_status().failures:
raise WorkflowExecutionError("Sink reported errors", self.sink.get_status())
if raise_warnings:
if self.source_status.warnings:
raise WorkflowExecutionError(
"Source reported warnings", self.source_status
)
if self.processor.get_status().warnings:
raise WorkflowExecutionError(
"Processor reported warnings", self.processor.get_status()
)
if hasattr(self, "sink") and self.sink.get_status().warnings:
raise WorkflowExecutionError(
"Sink reported warnings", self.sink.get_status()
)
def stop(self):
"""
Close all connections
"""
self.metadata.close()