Fix #2345 - Make bump & unify (#2359)

* Add installing instructions

* Unify makefile and automate bump version setup

* Update submake call

* Mark targets as phony

* Add help to recipes

* Update core publish

* Do not trigger install from echo

* Run make from root

* Prepare py_format from isort and black

* Run py_format

* Check black and isort formatting

* Update comment msg

.github/workflows/java-checkstyle.yml

@@ -54,7 +54,10 @@ jobs:
           body: |
             **The Java checkstyle failed.**
 
-            Please run `mvn googleformatter:format@reformat-sources` in the root of your repository and commit the changes to this PR. You can also use [pre-commit](https://pre-commit.com/) to automate the Java code formatting.
+            Please run `mvn googleformatter:format@reformat-sources` in the root of your repository and commit the changes to this PR.
+            You can also use [pre-commit](https://pre-commit.com/) to automate the Java code formatting.
+
+            You can install the pre-commit hooks with `make install_test precommit_install`.
 
       - name: Java checkstyle failed, check the comment in the PR
         if: steps.git.outcome != 'success'

.github/workflows/openmetadata-ingestion-core-version-comment.yml

@@ -35,6 +35,6 @@ jobs:
         with:
           issue-number: ${{ github.event.pull_request.number }}
           body: |
-            **Schema Change Detected. Needs py-ingestion-core version bump**
+            **Schema Change Detected. Needs ingestion-core version bump**
 
-            Please run `make bump-version-dev` in the ingestion-core folder of your repository and commit the changes to _version.py in this PR. Please ignore if this has been handled already.
+            Please run `make core_bump_version_dev` in the project's root and commit the changes to _version.py in this PR. Please ignore if this has been handled already.

.github/workflows/py-checkstyle.yml

@@ -54,7 +54,7 @@ jobs:
         run: |
           source env/bin/activate
           make generate
-          make black_check
+          make py_format_check
 
       - name: Create a comment in the PR with the instructions
         if: steps.style.outcome != 'success'
@@ -64,7 +64,10 @@ jobs:
           body: |
             **The Python checkstyle failed.**
 
-            Please run `make black` in the root of your repository and commit the changes to this PR. You can also use [pre-commit](https://pre-commit.com/) to automate the Python code formatting.
+            Please run `make py_format` in the root of your repository and commit the changes to this PR.
+            You can also use [pre-commit](https://pre-commit.com/) to automate the Python code formatting.
+
+            You can install the pre-commit hooks with `make install_test precommit_install`.
 
       - name: Python checkstyle failed, check the comment in the PR
         if: steps.style.outcome != 'success'

.github/workflows/py-ingestion-core-publish.yml

@@ -36,17 +36,9 @@ jobs:
       - name: Install Ubuntu related dependencies
         run: |
           sudo apt-get install -y libsasl2-dev unixodbc-dev python3-venv
-      - name: Generate models
+      - name: Install, Generate and Publish Test PyPi packages
-        working-directory: ingestion-core
-        run: |
-          python3 -m venv env
-          source env/bin/activate
-          make generate
-      - name: Publish Test PyPi packages
-        working-directory: ingestion-core
         env:
           TWINE_USERNAME: ${{ secrets.TWINE_USERNAME_TEST }}
           TWINE_PASSWORD: ${{ secrets.TWINE_PASSWORD_TEST }}
         run: |
-          source env/bin/activate
+          make core_publish
-          make publish

Makefile

@@ -1,57 +1,77 @@
-.PHONY: env38
+.DEFAULT_GOAL := help
 PY_SOURCE ?= ingestion/src
 
+.PHONY: help
+help:
+	@grep -E '^[a-zA-Z_-]+:.*?## .*$$' $(MAKEFILE_LIST) | sort | awk 'BEGIN {FS = ":.*?## "}; {printf "\033[35m%-30s\033[0m %s\n", $$1, $$2}'
+
+.PHONY: env38
 env38:
-#	virtualenv -p python3.8 env38
 	python3.8 -m venv env38
+
+.PHONY: clean_env37
 clean_env37:
 	rm -rf env38
 
-install:
+.PHONY: install
-	python3 -m pip install ingestion/
+install:  ## Install the ingestion module to the current environment
+	python -m pip install ingestion/
 
-install_test:
+.PHONY: install_test
-	python3 -m pip install "ingestion[test]/"
+install_test:  ## Install the ingestion module with test dependencies
+	python -m pip install "ingestion[test]/"
 
-install_dev:
+.PHONY: install_dev
-	python3 -m pip install "ingestion[dev]/"
+install_dev:  ## Install the ingestion module with dev dependencies
+	python -m pip install "ingestion[dev]/"
 
-precommit_install:
+.PHONY: precommit_install
+precommit_install:  ## Install the project's precommit hooks from .pre-commit-config.yaml
 	@echo "Installing pre-commit hooks"
-	@echo "Make sure to first run `make install_test`"
+	@echo "Make sure to first run install_test first"
 	pre-commit install
 
-isort:
+## Python Checkstyle
-	isort $(PY_SOURCE) --skip $(PY_SOURCE)/metadata/generated --profile black --multi-line 3
+.PHONY: lint
-
+lint:  ## Run pylint on the Python sources to analyze the codebase
-lint:
 	find $(PY_SOURCE) -path $(PY_SOURCE)/metadata/generated -prune -false -o -type f -name "*.py" | xargs pylint
 
-black:
+.PHONY: py_format
+py_format:  ## Run black and isort to format the Python codebase
+	isort $(PY_SOURCE) --skip $(PY_SOURCE)/metadata/generated --profile black --multi-line 3
 	black $(PY_SOURCE) --exclude $(PY_SOURCE)/metadata/generated
 
-black_check:
+.PHONY: py_format_check
+py_format_check:  ## Check if Python sources are correctly formatted
 	black --check --diff $(PY_SOURCE) --exclude $(PY_SOURCE)/metadata/generated
+	isort --check-only $(PY_SOURCE) --skip $(PY_SOURCE)/metadata/generated --profile black --multi-line 3
 
-generate:
+## Ingestion models generation
+.PHONY: generate
+generate:  ## Generate the pydantic models from the JSON Schemas to the ingestion module
 	@echo "Running Datamodel Code Generator"
 	@echo "Make sure to first run the install_dev recipe"
-	datamodel-codegen  --input catalog-rest-service/src/main/resources/json  --input-file-type jsonschema --output ingestion/src/metadata/generated
+	datamodel-codegen --input catalog-rest-service/src/main/resources/json --input-file-type jsonschema --output ingestion/src/metadata/generated
-	make install
+	$(MAKE) install
 
-run_ometa_integration_tests:
+## Ingestion tests & QA
+.PHONY: run_ometa_integration_tests
+run_ometa_integration_tests:  ## Run Python integration tests
 	coverage run -m pytest -c ingestion/setup.cfg --doctest-modules --junitxml=ingestion/junit/test-results-integration.xml --override-ini=testpaths="ingestion/tests/integration/ometa ingestion/tests/integration/stage"
 
-unit_ingestion:
+.PHONY: unit_ingestion
+unit_ingestion:  ## Run Python unit tests
 	coverage run -m pytest -c ingestion/setup.cfg -s --doctest-modules --junitxml=ingestion/junit/test-results-unit.xml --override-ini=testpaths="ingestion/tests/unit"
 
-coverage:
+.PHONY: coverage
+coverage:  ## Run all Python tests and generate the coverage report
 	coverage erase
-	make unit_ingestion
+	$(MAKE) unit_ingestion
-	make run_ometa_integration_tests
+	$(MAKE) run_ometa_integration_tests
 	coverage xml -i -o ingestion/coverage.xml
 
-sonar_ingestion:
+.PHONY: sonar_ingestion
+sonar_ingestion:  ## Run the Sonar analysis based on the tests results and push it to SonarCloud
 	docker run \
 		--rm \
 		-e SONAR_HOST_URL="https://sonarcloud.io" \
@@ -60,27 +80,74 @@ sonar_ingestion:
 		sonarsource/sonar-scanner-cli \
 		-Dproject.settings=ingestion/sonar-project.properties
 
-publish:
+## Ingestion publish
-	make install_dev generate
+.PHONY: publish
+publish:  ## Publish the ingestion module to PyPI
+	$(MAKE) install_dev generate
 	cd ingestion; \
 	  python setup.py install sdist bdist_wheel; \
 	  twine check dist/*; \
 	  twine upload dist/*
 
-build_docker_base:
+## Docker operators
-	make install_dev generate
+.PHONY: build_docker_base
+build_docker_base:  ## Build the base Docker image for the Ingestion Framework Sources
+	$(MAKE) install_dev generate
 	docker build -f ingestion/connectors/Dockerfile-base ingestion/ -t openmetadata/ingestion-connector-base
 
-build_docker_connectors:
+.PHONY: build_docker_connectors
+build_docker_connectors:  ## Build all Ingestion Framework Sources Images to be used as Docker Operators in Airflow
 	@echo "Building Docker connectors. Make sure to run build_docker_base first"
 	python ingestion/connectors/docker-cli.py build
 
-push_docker_connectors:
+.PHONY: push_docker_connectors
+push_docker_connectors:  ## Push all Sources Docker Images to DockerHub
 	@echo "Pushing Docker connectors. Make sure to run build_docker_connectors first"
 	python ingestion/connectors/docker-cli.py push
 
-yarn_install_cache:
+## Yarn
+.PHONY: yarn_install_cache
+yarn_install_cache:  ## Use Yarn to install UI dependencies
 	cd openmetadata-ui/src/main/resources/ui && yarn install --frozen-lockfile
 
-yarn_start_dev_ui:
+.PHONY: yarn_start_dev_ui
+yarn_start_dev_ui:  ## Run the UI locally with Yarn
 	cd openmetadata-ui/src/main/resources/ui && yarn start
+
+## Ingestion Core
+.PHONY: core_install_dev
+core_install_dev:  ## Prepare a virtualenv for the ingestion-core module
+	cd ingestion-core; \
+		rm -rf venv; \
+		python -m virtualenv venv; \
+		. venv/bin/activate; \
+		python -m pip install ".[dev]"
+
+.PHONY: core_clean
+core_clean:  ## Clean the ingestion-core generated files
+	rm -rf ingestion-core/src/metadata/generated
+	rm -rf ingestion-core/build
+	rm -rf ingestion-core/dist
+
+.PHONY: core_generate
+core_generate:  ## Generate the pydantic models from the JSON Schemas to the ingestion-core module
+	$(MAKE) core_install_dev
+	mkdir -p ingestion-core/src/metadata/generated
+	. ingestion-core/venv/bin/activate
+	datamodel-codegen --input catalog-rest-service/src/main/resources/json  --input-file-type jsonschema --output ingestion-core/src/metadata/generated
+
+.PHONY: core_bump_version_dev
+core_bump_version_dev:  ## Bump a `dev` version to the ingestion-core module. To be used when schemas are updated
+	$(MAKE) core_install_dev
+	cd ingestion-core; \
+		. venv/bin/activate; \
+		python -m incremental.update metadata --dev
+
+.PHONY: core_publish
+core_publish:  ## Install, generate and publish the ingestion-core module to Test PyPI
+	$(MAKE) core_clean core_generate
+	cd ingestion-core; \
+		. venv/bin/activate; \
+		python setup.py install sdist bdist_wheel; \
+		twine check dist/*; \
+		twine upload -r testpypi dist/*

ingestion-core/Makefile

@@ -1,21 +0,0 @@
-install_dev:
-	python -m pip install ".[dev]"
-
-generate:
-	mkdir -p src/metadata/generated
-	python3 -m pip install --upgrade pip setuptools
-	make install_dev
-	datamodel-codegen --input ../catalog-rest-service/src/main/resources/json --input-file-type jsonschema --output src/metadata/generated
-
-clean:
-	rm -rf src/metadata/generated
-	rm -rf build
-	rm -rf dist
-
-bump-version-dev:
-	python -m incremental.update metadata --dev
-
-publish: clean generate
-	python setup.py install sdist bdist_wheel
-	twine check dist/*
-	twine upload -r testpypi dist/*

ingestion/src/metadata/ingestion/source/amundsen.py

@@ -15,6 +15,8 @@ import uuid
 from dataclasses import dataclass, field
 from typing import Iterable, List, Optional
 
+from pydantic import SecretStr
+
 from metadata.config.common import ConfigModel
 from metadata.generated.schema.api.services.createDatabaseService import (
     CreateDatabaseServiceEntityRequest,
@@ -41,7 +43,6 @@ from metadata.utils.sql_queries import (
     NEO4J_AMUNDSEN_TABLE_QUERY,
     NEO4J_AMUNDSEN_USER_QUERY,
 )
-from pydantic import SecretStr
 
 logger: logging.Logger = logging.getLogger(__name__)
 

ingestion/src/metadata/ingestion/source/bigquery.py

@@ -9,14 +9,12 @@
 #  See the License for the specific language governing permissions and
 #  limitations under the License.
 
+import json
+import logging
 import os
-from typing import Optional, Tuple, Any
+import tempfile
-import json, tempfile, logging
+from typing import Any, Optional, Tuple
 
-from metadata.ingestion.ometa.openmetadata_rest import MetadataServerConfig
-from metadata.ingestion.source.sql_source import SQLSource
-from metadata.ingestion.source.sql_source_common import SQLConnectionConfig
-from metadata.utils.column_type_parser import create_sqlalchemy_type
 from sqlalchemy_bigquery import _types
 from sqlalchemy_bigquery._struct import STRUCT
 from sqlalchemy_bigquery._types import (
@@ -24,6 +22,11 @@ from sqlalchemy_bigquery._types import (
     _get_transitive_schema_fields,
 )
 
+from metadata.ingestion.ometa.openmetadata_rest import MetadataServerConfig
+from metadata.ingestion.source.sql_source import SQLSource
+from metadata.ingestion.source.sql_source_common import SQLConnectionConfig
+from metadata.utils.column_type_parser import create_sqlalchemy_type
+
 GEOGRAPHY = create_sqlalchemy_type("GEOGRAPHY")
 _types._type_map["GEOGRAPHY"] = GEOGRAPHY
 

ingestion/src/metadata/ingestion/source/redshift_usage.py

@@ -24,7 +24,6 @@ from metadata.ingestion.source.sql_alchemy_helper import (
 from metadata.utils.helpers import get_start_and_end
 from metadata.utils.sql_queries import REDSHIFT_SQL_STATEMENT
 
-
 logger = logging.getLogger(__name__)
 
 

ingestion/src/metadata/ingestion/source/sql_source.py

@@ -18,6 +18,10 @@ import traceback
 import uuid
 from typing import Dict, Iterable, List, Optional, Tuple
 
+from sqlalchemy import create_engine
+from sqlalchemy.engine.reflection import Inspector
+from sqlalchemy.inspection import inspect
+
 from metadata.generated.schema.entity.data.database import Database
 from metadata.generated.schema.entity.data.table import (
     Column,
@@ -41,9 +45,6 @@ from metadata.ingestion.source.sql_source_common import (
 )
 from metadata.utils.column_type_parser import ColumnTypeParser
 from metadata.utils.helpers import get_database_service_or_create
-from sqlalchemy import create_engine
-from sqlalchemy.engine.reflection import Inspector
-from sqlalchemy.inspection import inspect
 
 logger: logging.Logger = logging.getLogger(__name__)
 

ingestion/src/metadata/utils/column_type_parser.py

@@ -1,6 +1,5 @@
 import re
-from typing import Any, Dict, Optional, Type
+from typing import Any, Dict, List, Optional, Type, Union
-from typing import List, Union
 
 from sqlalchemy.sql import sqltypes as types
 from sqlalchemy.types import TypeEngine