2024-12-10 19:09:00 +01:00

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Kubernetes GKE Deployment /deployment/kubernetes/gke false

GKE on Google Cloud Platform Deployment

OpenMetadata supports the Installation and Running of Application on Google Kubernetes Engine through Helm Charts. However, there are some additional configurations which needs to be done as prerequisites for the same.

{%note%}

Google Kubernetes Engine (GKE) Auto Pilot Mode is not compatible with one of OpenMetadata Dependencies - ElasticSearch. The reason being that ElasticSearch Pods require Elevated permissions to run initContainers for changing configurations which is not allowed by GKE AutoPilot PodSecurityPolicy.

{%/note%}

{%note noteType="Warning"%}

All the code snippets in this section assume the default namespace for kubernetes.

{%/note%}

Prerequisites

Cloud Database with CloudSQL and ElasticCloud for GCP as Search Engine

It is recommended to use GCP Cloud SQL services for Database and Elastic Cloud GCP for Search Engine for Production.

We support -

  • Cloud SQL (MySQL) engine version 8 or higher
  • Cloud SQL (postgreSQL) engine version 12 or higher
  • ElasticSearch Engine version 8.X (upto 8.10.X)

We recommend -

  • CloudSQL to be Multi Zone Available
  • Elastic Cloud Environment with multiple zones and minimum 2 nodes

Once you have the Database and Search Engine configured and available, update the helm values below for OpenMetadata kubernetes deployments to connect with Database and ElasticSearch.

# openmetadata-values.prod.yaml
...
openmetadata:
  config:
    elasticsearch:
      host: <ELASTIC_CLOUD_SERVICE_ENDPOINT_WITHOUT_HTTPS>
      searchType: elasticsearch
      port: 443
      scheme: https
      connectionTimeoutSecs: 5
      socketTimeoutSecs: 60
      keepAliveTimeoutSecs: 600
      batchSize: 10
      auth:
        enabled: true
        username: <ELASTIC_CLOUD_USERNAME>
        password:
          secretRef: elasticsearch-secrets
          secretKey: openmetadata-elasticsearch-password
    database:
      host: <GCP_CLOUD_SQL_ENDPOINT_IP>
      port: 3306
      driverClass: com.mysql.cj.jdbc.Driver
      dbScheme: mysql 
      dbUseSSL: true
      databaseName: <GCP_CLOUD_SQL_DATABASE_NAME>
      auth:
        username: <GCP_CLOUD_SQL_DATABASE_USERNAME>
        password:
          secretRef: mysql-secrets
          secretKey: openmetadata-mysql-password
  ...

{%note noteType="Tip"%}

For Database as PostgreSQL, the use the below config for database values -

# openmetadata-values.prod.yaml
...
openmetadata:
  config:
    ...
    database:
      host: <GCP_CLOUD_SQL_ENDPOINT_IP>
      port: 5432
      driverClass: org.postgresql.Driver
      dbScheme: postgresql 
      dbUseSSL: true
      databaseName: <GCP_CLOUD_SQL_DATABASE_NAME>
      auth:
        username: <GCP_CLOUD_SQL_DATABASE_USERNAME>
        password:
          secretRef: sql-secrets
          secretKey: openmetadata-sql-password

{%/note%}

{%note noteType="Tip"%}

Make sure to create CloudSQL and ElasticSearch credentials as Kubernetes Secrets mentioned here.

Also, disable MySQL and ElasticSearch from OpenMetadata Dependencies Helm Charts as mentioned in the FAQs here.

{%/note%}

Persistent Volumes with ReadWriteMany Access Modes

OpenMetadata helm chart depends on Airflow and Airflow expects a persistent disk that support ReadWriteMany (the volume can be mounted as read-write by many nodes).

The workaround is to create nfs-server disk on Google Kubernetes Engine and use that as the persistent claim and deploy OpenMetadata by implementing the following steps in order.

Create NFS Share

Provision GCP Persistent Disk for Google Kubernetes Engine

Run the below command to create a gcloud compute zonal disk. For more information on Google Cloud Disk Options, please visit here.

gcloud compute disks create --size=100GB --zone=<zone_id> nfs-disk

Deploy NFS Server in GKE

Code Samples

# nfs-server-deployment.yml
apiVersion: apps/v1
kind: Deployment
metadata:
  name: nfs-server
spec:
  replicas: 1
  selector:
    matchLabels:
      role: nfs-server
  template:
    metadata:
      labels:
        role: nfs-server
    spec:
      initContainers:
      - name: init-airflow-directories
        image: busybox
        command: ['sh', '-c', 'mkdir -p /exports/airflow-dags /exports/airflow-logs']
        volumeMounts:
          - mountPath: /exports
            name: nfs-pvc
      containers:
      - name: nfs-server
        image: gcr.io/google_containers/volume-nfs:0.8
        ports:
          - name: nfs
            containerPort: 2049
          - name: mountd
            containerPort: 20048
          - name: rpcbind
            containerPort: 111
        securityContext:
          privileged: true
        volumeMounts:
          - mountPath: /exports
            name: nfs-pvc
      volumes:
        - name: nfs-pvc
          gcePersistentDisk:
            pdName: nfs-disk
            fsType: ext4
---
# nfs-cluster-ip-service.yml
apiVersion: v1
kind: Service
metadata:
  name: nfs-server
spec:
  ports:
    - name: nfs
      port: 2049
    - name: mountd
      port: 20048
    - name: rpcbind
      port: 111
  selector:
    role: nfs-server

Run the commands below and ensure the pods are running.

kubectl create -f nfs-server-deployment.yml
kubectl create -f nfs-cluster-ip-service.yml

We create a ClusterIP Service for pods to access NFS within the cluster at a fixed IP/DNS.

Provision NFS backed PV and PVC for Airflow DAGs and Airflow Logs

Update <NFS_SERVER_CLUSTER_IP> with the NFS Service Cluster IP Address for below code snippets. You can get the clusterIP using the following command

kubectl get service nfs-server -o jsonpath='{.spec.clusterIP}'

Code Samples for PV and PVC for Airflow DAGs

# dags_pv_pvc.yml
apiVersion: v1
kind: PersistentVolume
metadata:
  name: openmetadata-dependencies-dags-pv
spec:
  capacity:
    storage: 10Gi
  accessModes:
    - ReadWriteMany
  nfs:
    server: <NFS_SERVER_CLUSTER_IP>
    path: "/airflow-dags"

---
apiVersion: v1
kind: PersistentVolumeClaim
metadata:
  labels:
    app: airflow
    release: openmetadata-dependencies
  name: openmetadata-dependencies-dags
  namespace: default
spec:
  accessModes:
  - ReadWriteMany
  resources:
    requests:
      storage: 10Gi
  storageClassName: ""

Create Persistent Volumes and Persistent Volume claims with the below command.

kubectl create -f dags_pv_pvc.yml

Code Samples for PV and PVC for Airflow Logs

# logs_pv_pvc.yml
apiVersion: v1
kind: PersistentVolume
metadata:
  name: openmetadata-dependencies-logs-pv
spec:
  capacity:
    storage: 10Gi
  accessModes:
    - ReadWriteMany
  nfs:
    server: <NFS_SERVER_CLUSTER_IP>
    path: "/airflow-logs"

---
apiVersion: v1
kind: PersistentVolumeClaim
metadata:
  labels:
    app: airflow
  name: openmetadata-dependencies-logs
  namespace: default
spec:
  accessModes:
  - ReadWriteMany
  resources:
    requests:
      storage: 10Gi
  storageClassName: ""

Create Persistent Volumes and Persistent Volume claims with the below command.

kubectl create -f logs_pv_pvc.yml

Change owner and permission manually on disks

Since airflow pods run as non root users, they would not have write access on the nfs server volumes. In order to fix the permission here, spin up a pod with persistent volumes attached and run it once.

# permissions_pod.yml
apiVersion: v1
kind: Pod
metadata:
  creationTimestamp: null
  labels:
    run: my-permission-pod
  name: my-permission-pod
spec:
  containers:
  - image: nginx
    name: my-permission-pod
    volumeMounts:
    - name: airflow-dags
      mountPath: /airflow-dags
    - name: airflow-logs
      mountPath: /airflow-logs
  volumes:
  - name: airflow-logs
    persistentVolumeClaim:
      claimName: openmetadata-dependencies-logs
  - name: airflow-dags
    persistentVolumeClaim:
      claimName: openmetadata-dependencies-dags
  dnsPolicy: ClusterFirst
  restartPolicy: Always

{%note%}

Airflow runs the pods with linux user name as airflow and linux user id as 50000.

{%/note%}

Run the below command to create the pod and fix the permissions

kubectl create -f permissions_pod.yml

Once the permissions pod is up and running, execute the below commands within the container.

kubectl exec --tty my-permission-pod --container my-permission-pod -- chown -R 50000 /airflow-dags /airflow-logs
# If needed
kubectl exec --tty my-permission-pod --container my-permission-pod -- chmod -R a+rwx /airflow-dags

Create OpenMetadata dependencies Values

Override openmetadata dependencies airflow helm values to bind the nfs persistent volumes for DAGs and logs.

# values-dependencies.yml
airflow:
  airflow:
    extraVolumeMounts:
      - mountPath: /airflow-logs
        name: nfs-airflow-logs
      - mountPath: /airflow-dags/dags
        name: nfs-airflow-dags
    extraVolumes:
      - name: nfs-airflow-logs
        persistentVolumeClaim:
          claimName: openmetadata-dependencies-logs
      - name: nfs-airflow-dags
        persistentVolumeClaim:
          claimName: openmetadata-dependencies-dags
    config:
      AIRFLOW__OPENMETADATA_AIRFLOW_APIS__DAG_GENERATED_CONFIGS: "/airflow-dags/dags"
  dags:
    path: /airflow-dags/dags
    persistence:
      enabled: false
  logs:
    path: /airflow-logs
    persistence:
      enabled: false

{%note%}

For more information on airflow helm chart values, please refer to airflow-helm.

When deploying openmeteadata dependencies helm chart, use the below command -

helm install openmetadata-dependencies open-metadata/openmetadata-dependencies --values values-dependencies.yaml

{%/note%}

The above command uses configurations defined here. You can modify any configuration and deploy by passing your own values.yaml

helm install openmetadata-dependencies open-metadata/openmetadata-dependencies --values <path-to-values-file>

Once the openmetadata dependencies helm chart deployed, you can then run the below command to install the openmetadata helm chart -

helm install openmetadata open-metadata/openmetadata --values <path-to-values-file>

Troubleshooting

Pods are stuck in Pending State due to Persistent Volume Creation Failure

If you came across invalid access type while creating the pvc, and the permission pod is stuck in "pending" state.

The above error might have occurred due to the pvc volumes not setup or pvc volumes are not mounted properly.

{% image src="/images/v1.6/deployment/troubleshoot/dag-log.png" alt="dag-log" /%} {% image src="/images/v1.6/deployment/troubleshoot/permission-pod-events.png" alt="permission-pod-events" caption="Permission pod events" /%}

Please validate:

  • all the prerequisites mentioned in this section
  • the configuration of dags_pv_pvc.yml file
  • storageClassName field in YAML file

FAQs

{% partial file="/v1.6/deployment/faqs.md" /%}