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Upgrade quarto and include mitigation for title issue, fix links (#1851)
* Upgrade quarto and include mitigation for title issue, fix links * repo_root * dont run quarto independently * test paths * test * resolve intermediate parents * remove print
This commit is contained in:
Jack Gerrits
GitHub
parent
cd3b5c6bbd
commit
de757707bc
@ -14,9 +14,9 @@ RUN apt-get update \
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&& apt-get -y install --no-install-recommends build-essential npm \
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&& apt-get autoremove -y \
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&& apt-get clean -y \
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&& wget https://github.com/quarto-dev/quarto-cli/releases/download/v1.4.549/quarto-1.4.549-linux-amd64.deb \
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&& dpkg -i quarto-1.4.549-linux-amd64.deb \
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&& rm -rf /var/lib/apt/lists/* quarto-1.4.549-linux-amd64.deb
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&& wget https://github.com/quarto-dev/quarto-cli/releases/download/v1.5.23/quarto-1.5.23-linux-amd64.deb \
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&& dpkg -i quarto-1.5.23-linux-amd64.deb \
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&& rm -rf /var/lib/apt/lists/* quarto-1.5.23-linux-amd64.deb
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ENV DEBIAN_FRONTEND=dialog
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# For docs
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@ -33,12 +33,12 @@ RUN cd website
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RUN yarn install --frozen-lockfile --ignore-engines
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RUN arch=$(arch | sed s/aarch64/arm64/ | sed s/x86_64/amd64/) && \
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wget -q https://github.com/quarto-dev/quarto-cli/releases/download/v1.4.549/quarto-1.4.549-linux-${arch}.tar.gz && \
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wget -q https://github.com/quarto-dev/quarto-cli/releases/download/v1.5.23/quarto-1.5.23-linux-${arch}.tar.gz && \
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mkdir -p /home/autogen/quarto/ && \
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tar -xzf quarto-1.4.549-linux-${arch}.tar.gz --directory /home/autogen/quarto/ && \
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rm quarto-1.4.549-linux-${arch}.tar.gz
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tar -xzf quarto-1.5.23-linux-${arch}.tar.gz --directory /home/autogen/quarto/ && \
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rm quarto-1.5.23-linux-${arch}.tar.gz
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ENV PATH="${PATH}:/home/autogen/quarto/quarto-1.4.549/bin/"
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ENV PATH="${PATH}:/home/autogen/quarto/quarto-1.5.23/bin/"
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# Exposes the Yarn port for Docusaurus
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EXPOSE 3000
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18
.github/workflows/deploy-website.yml
vendored
18
.github/workflows/deploy-website.yml
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@ -44,12 +44,9 @@ jobs:
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- name: quarto install
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working-directory: ${{ runner.temp }}
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run: |
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wget -q https://github.com/quarto-dev/quarto-cli/releases/download/v1.4.549/quarto-1.4.549-linux-amd64.tar.gz
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tar -xzf quarto-1.4.549-linux-amd64.tar.gz
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echo "$(pwd)/quarto-1.4.549/bin/" >> $GITHUB_PATH
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- name: quarto run
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run: |
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quarto render .
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wget -q https://github.com/quarto-dev/quarto-cli/releases/download/v1.5.23/quarto-1.5.23-linux-amd64.tar.gz
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tar -xzf quarto-1.5.23-linux-amd64.tar.gz
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echo "$(pwd)/quarto-1.5.23/bin/" >> $GITHUB_PATH
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- name: Process notebooks
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run: |
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python process_notebooks.py render
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@ -90,12 +87,9 @@ jobs:
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- name: quarto install
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working-directory: ${{ runner.temp }}
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run: |
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wget -q https://github.com/quarto-dev/quarto-cli/releases/download/v1.4.549/quarto-1.4.549-linux-amd64.tar.gz
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tar -xzf quarto-1.4.549-linux-amd64.tar.gz
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echo "$(pwd)/quarto-1.4.549/bin/" >> $GITHUB_PATH
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- name: quarto run
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run: |
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quarto render .
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wget -q https://github.com/quarto-dev/quarto-cli/releases/download/v1.5.23/quarto-1.5.23-linux-amd64.tar.gz
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tar -xzf quarto-1.5.23-linux-amd64.tar.gz
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echo "$(pwd)/quarto-1.5.23/bin/" >> $GITHUB_PATH
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- name: Process notebooks
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run: |
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python process_notebooks.py render
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@ -56,11 +56,11 @@ class Result:
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def check_quarto_bin(quarto_bin: str = "quarto") -> None:
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"""Check if quarto is installed."""
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try:
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subprocess.check_output([quarto_bin, "--version"], text=True).strip()
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# version = tuple(map(int, version.split(".")))
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# if version < (1, 5, 23):
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# print("Quarto version is too old. Please upgrade to 1.5.23 or later.")
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# sys.exit(1)
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version = subprocess.check_output([quarto_bin, "--version"], text=True).strip()
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version = tuple(map(int, version.split(".")))
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if version < (1, 5, 23):
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print("Quarto version is too old. Please upgrade to 1.5.23 or later.")
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sys.exit(1)
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except FileNotFoundError:
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print("Quarto is not installed. Please install it from https://quarto.org")
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@ -127,6 +127,27 @@ def skip_reason_or_none_if_ok(notebook: Path) -> typing.Optional[str]:
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return None
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def extract_title(notebook: Path) -> Optional[str]:
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"""Extract the title of the notebook."""
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with open(notebook, "r", encoding="utf-8") as f:
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content = f.read()
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# Load the json and get the first cell
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json_content = json.loads(content)
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first_cell = json_content["cells"][0]
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# find the # title
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for line in first_cell["source"]:
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if line.startswith("# "):
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title = line[2:].strip()
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# Strip off the { if it exists
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if "{" in title:
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title = title[: title.find("{")].strip()
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return title
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return None
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def process_notebook(src_notebook: Path, website_dir: Path, notebook_dir: Path, quarto_bin: str, dry_run: bool) -> str:
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"""Process a single notebook."""
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@ -136,6 +157,16 @@ def process_notebook(src_notebook: Path, website_dir: Path, notebook_dir: Path,
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if "skip_render" in metadata:
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return fmt_skip(src_notebook, "skip_render is in notebook metadata")
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title = extract_title(src_notebook)
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if title is None:
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return fmt_error(src_notebook, "Title not found in notebook")
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front_matter = {}
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if "front_matter" in metadata:
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front_matter = metadata["front_matter"]
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front_matter["title"] = title
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if in_notebook_dir:
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relative_notebook = src_notebook.resolve().relative_to(notebook_dir.resolve())
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dest_dir = notebooks_target_dir(website_directory=website_dir)
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@ -190,11 +221,7 @@ def process_notebook(src_notebook: Path, website_dir: Path, notebook_dir: Path,
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src_notebook, f"Failed to render {src_notebook}\n\nstderr:\n{result.stderr}\nstdout:\n{result.stdout}"
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)
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front_matter = {}
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if "front_matter" in metadata:
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front_matter = metadata["front_matter"]
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post_process_mdx(target_file, front_matter)
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post_process_mdx(target_file, src_notebook, front_matter)
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return fmt_ok(src_notebook)
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@ -281,8 +308,7 @@ def get_error_info(nb: NotebookNode) -> Optional[NotebookError]:
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# rendered_notebook is the final mdx file
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def post_process_mdx(rendered_mdx: Path, front_matter: Dict) -> None:
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notebook_name = f"{rendered_mdx.stem}.ipynb"
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def post_process_mdx(rendered_mdx: Path, source_notebooks: Path, front_matter: Dict) -> None:
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with open(rendered_mdx, "r", encoding="utf-8") as f:
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content = f.read()
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@ -292,8 +318,22 @@ def post_process_mdx(rendered_mdx: Path, front_matter: Dict) -> None:
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front_matter = yaml.safe_load(content[4:front_matter_end])
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content = content[front_matter_end + 3 :]
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front_matter["source_notebook"] = f"/notebook/{notebook_name}"
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front_matter["custom_edit_url"] = f"https://github.com/microsoft/autogen/edit/main/notebook/{notebook_name}"
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# Each intermediate path needs to be resolved for this to work reliably
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repo_root = Path(__file__).parent.resolve().parent.resolve()
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repo_relative_notebook = source_notebooks.resolve().relative_to(repo_root)
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front_matter["source_notebook"] = f"/{repo_relative_notebook}"
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front_matter["custom_edit_url"] = f"https://github.com/microsoft/autogen/edit/main/{repo_relative_notebook}"
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# Is there a title on the content? Only search up until the first code cell
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first_code_cell = content.find("```")
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if first_code_cell != -1:
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title_search_content = content[:first_code_cell]
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else:
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title_search_content = content
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title_exists = title_search_content.find("# ") != -1
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if not title_exists:
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content = f"# {front_matter['title']}\n{content}"
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# inject in content directly after the markdown title the word done
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# Find the end of the line with the title
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@ -305,9 +345,7 @@ def post_process_mdx(rendered_mdx: Path, front_matter: Dict) -> None:
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if "{" in title:
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title = title[: title.find("{")].strip()
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front_matter["title"] = title
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github_link = f"https://github.com/microsoft/autogen/blob/main/notebook/{notebook_name}"
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github_link = f"https://github.com/microsoft/autogen/blob/main/{repo_relative_notebook}"
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content = (
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content[:title_end]
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+ "\n[]("
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@ -318,10 +356,11 @@ def post_process_mdx(rendered_mdx: Path, front_matter: Dict) -> None:
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# If no colab link is present, insert one
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if "colab-badge.svg" not in content:
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colab_link = f"https://colab.research.google.com/github/microsoft/autogen/blob/main/{repo_relative_notebook}"
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content = (
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content[:title_end]
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+ "\n[](https://colab.research.google.com/github/microsoft/autogen/blob/main/notebook/"
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+ notebook_name
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+ "\n[]("
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+ colab_link
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+ ")"
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+ content[title_end:]
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)
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