12 Commits

Author SHA1 Message Date
Cesar Berrospi Ramis
984cb137f6
fix: guess HTML content starting with script tag (#1673)
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
2025-06-02 08:43:24 +02:00
Michele Dolfi
5458a88464
ci: add coverage and ruff (#1383)
* add coverage calculation and push

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* new codecov version and usage of token

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* enable ruff formatter instead of black and isort

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* apply ruff lint fixes

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* apply ruff unsafe fixes

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* add removed imports

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* runs 1 on linter issues

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* finalize linter fixes

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* Update pyproject.toml

Co-authored-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
Signed-off-by: Michele Dolfi <97102151+dolfim-ibm@users.noreply.github.com>

---------

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>
Signed-off-by: Michele Dolfi <97102151+dolfim-ibm@users.noreply.github.com>
Co-authored-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
2025-04-14 18:01:26 +02:00
Christoph Auer
3960b199d6
feat: Add DoclingParseV4 backend, using high-level docling-parse API (#905)
* Add DoclingParseV3 backend implementation

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Use docling-core with docling-parse types

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Fixes and test updates

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Fix streams

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Fix streams

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Reset tests

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* update test cases

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* update test units

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Add back DoclingParse v1 backend, pipeline options

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Update locks

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* fix: update docling-core to 2.22.0

Update dependency library docling-core to latest release 2.22.0
Fix regression tests and ground truth files

Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>

* Ground-truth files updated

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Update tests, use TextCell.from_ocr property

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Text fixes, new test data

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Rename docling backend to v4

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Test all backends, fixes

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Reset all tests to use docling-parse v1 for now

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Fixes for DPv4 backend init, better test coverage

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* test_input_doc use default backend

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

---------

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
Co-authored-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
2025-03-18 10:38:19 +01:00
Michele Dolfi
fa16b12316
chore: move to docling-project org (#1160)
* chore: rename org

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* Update docs/faq/index.md

Co-authored-by: Panos Vagenas <35837085+vagenas@users.noreply.github.com>
Signed-off-by: Michele Dolfi <97102151+dolfim-ibm@users.noreply.github.com>

* update github pages

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* revert test content

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

---------

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>
Signed-off-by: Michele Dolfi <97102151+dolfim-ibm@users.noreply.github.com>
Co-authored-by: Panos Vagenas <35837085+vagenas@users.noreply.github.com>
2025-03-14 12:35:29 +01:00
Cesar Berrospi Ramis
428b656793
feat(xml-jats): parse XML JATS documents (#967)
* chore(xml-jats): separate authors and affiliations

In XML PubMed (JATS) backend, convert authors and affiliations as they
are typically rendered on PDFs.

Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>

* fix(xml-jats): replace new line character by a space

Instead of removing new line character from text, replace it by a space character.

Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>

* feat(xml-jats): improve existing parser and extend features

Partially support lists, respect reading order, parse more sections, support equations, better text formatting.

Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>

* chore(xml-jats): rename PubMed objects to JATS

Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>

---------

Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
2025-02-17 10:43:31 +01:00
Tobias Strebitzer
00d9405b0a
feat: Add support for CSV input with new backend to transform CSV files to DoclingDocument (#945)
* feat: Implement csv backend and format detection

Signed-off-by: Tobias Strebitzer <tobias.strebitzer@magloft.com>

* test: Implement csv parsing and format tests

Signed-off-by: Tobias Strebitzer <tobias.strebitzer@magloft.com>

* docs: Add example and CSV format documentation

Signed-off-by: Tobias Strebitzer <tobias.strebitzer@magloft.com>

* feat: Add support for various CSV dialects and update documentation

Signed-off-by: Tobias Strebitzer <tobias.strebitzer@magloft.com>

* feat: Add validation for delimiters and tests for inconsistent csv files

Signed-off-by: Tobias Strebitzer <tobias.strebitzer@magloft.com>

---------

Signed-off-by: Tobias Strebitzer <tobias.strebitzer@magloft.com>
2025-02-14 08:55:09 +01:00
Michele Dolfi
9114ada7bc
fix: Test cases for RTL programmatic PDFs and fixes for the formula model (#903)
fix: Support for RTL programmatic documents
fix(parser): detect and handle rotated pages
fix(parser): fix bug causing duplicated text
fix(formula): improve stopping criteria
chore: update lock file
fix: temporary constrain beautifulsoup


* switch to code formula model v1.0.1 and new test pdf

Signed-off-by: Matteo-Omenetti <Matteo.Omenetti1@ibm.com>

* switch to code formula model v1.0.1 and new test pdf

Signed-off-by: Matteo-Omenetti <Matteo.Omenetti1@ibm.com>

* cleaned up the data folder in the tests

Signed-off-by: Peter Staar <taa@zurich.ibm.com>

* switch to code formula model v1.0.1 and new test pdf

Signed-off-by: Matteo-Omenetti <Matteo.Omenetti1@ibm.com>

* added three test-files for right-to-left

Signed-off-by: Peter Staar <taa@zurich.ibm.com>

* fix black

Signed-off-by: Matteo-Omenetti <Matteo.Omenetti1@ibm.com>

* added new gt for test_e2e_conversion

Signed-off-by: Matteo-Omenetti <Matteo.Omenetti1@ibm.com>

* added new gt for test_e2e_conversion

Signed-off-by: Matteo-Omenetti <Matteo.Omenetti1@ibm.com>

* Add code to expose text direction of cell

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* new test file

Signed-off-by: Matteo-Omenetti <Matteo.Omenetti1@ibm.com>

* update lock

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* fix mypy reports

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* fix example filepaths

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* add test data results

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* pin wheel of latest docling-parse release

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* use latest docling-core

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* remove debugging code

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* fix path to files in example

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* Revert unwanted RTL additions

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

* Fix test data paths in examples

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

---------

Signed-off-by: Matteo-Omenetti <Matteo.Omenetti1@ibm.com>
Signed-off-by: Peter Staar <taa@zurich.ibm.com>
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>
Co-authored-by: Matteo-Omenetti <Matteo.Omenetti1@ibm.com>
Co-authored-by: Peter Staar <taa@zurich.ibm.com>
Co-authored-by: Christoph Auer <cau@zurich.ibm.com>
2025-02-07 08:43:31 +01:00
Christoph Auer
70d68b6164
feat: Add option to define page range (#852)
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
2025-01-31 15:23:00 +01:00
Panos Vagenas
88a0e66adc
feat: add Docling JSON ingestion (#783)
* feat: add Docling JSON ingestion

Signed-off-by: Panos Vagenas <35837085+vagenas@users.noreply.github.com>

* update conversion as per review comments, add tests, revert Docling JSON disambiguation, document intricacies

Signed-off-by: Panos Vagenas <35837085+vagenas@users.noreply.github.com>

* Update docling/backend/json/docling_json_backend.py

Co-authored-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
Signed-off-by: Panos Vagenas <35837085+vagenas@users.noreply.github.com>

---------

Signed-off-by: Panos Vagenas <35837085+vagenas@users.noreply.github.com>
Co-authored-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
2025-01-24 18:05:23 +01:00
Lucas Morin
fd034802b6
feat: Create a backend to transform PubMed XML files to DoclingDocument (#557)
Signed-off-by: lucas-morin <lucas.morin222@gmail.com>
2024-12-17 19:27:09 +01:00
Cesar Berrospi Ramis
4e087504cc
feat: create a backend to parse USPTO patents into DoclingDocument (#606)
* feat: add PATENT_USPTO as input format

Signed-off-by: Cesar Berrospi Ramis <ceb@zurich.ibm.com>

* feat: add USPTO backend parser

Add a backend implementation to parse patent applications and
grants from the United States Patent Office (USPTO).

Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>

* refactor: change the name of the USPTO input format

Change the name of the patent USPTO input format to show the typical format (XML).

Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>

* refactor: address several input formats with same mime type

Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>

* refactor: group XML backend parsers in a subfolder

Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>

* chore: add safe initialization of PatentUsptoDocumentBackend

Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>

---------

Signed-off-by: Cesar Berrospi Ramis <ceb@zurich.ibm.com>
Signed-off-by: Cesar Berrospi Ramis <75900930+ceberam@users.noreply.github.com>
2024-12-17 16:35:23 +01:00
Michele Dolfi
3496b4838f
fix: set valid=false for invalid backends (#171)
* fix: set valid=false for invalid backends

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>

* Add test case for InputDocument

Signed-off-by: Christoph Auer <cau@zurich.ibm.com>

---------

Signed-off-by: Michele Dolfi <dol@zurich.ibm.com>
Signed-off-by: Christoph Auer <cau@zurich.ibm.com>
Co-authored-by: Christoph Auer <cau@zurich.ibm.com>
2024-10-23 15:52:30 +02:00