docling/tests/test_input_doc.py
Tobias Strebitzer 00d9405b0a
feat: Add support for CSV input with new backend to transform CSV files to DoclingDocument (#945)
* feat: Implement csv backend and format detection

Signed-off-by: Tobias Strebitzer <tobias.strebitzer@magloft.com>

* test: Implement csv parsing and format tests

Signed-off-by: Tobias Strebitzer <tobias.strebitzer@magloft.com>

* docs: Add example and CSV format documentation

Signed-off-by: Tobias Strebitzer <tobias.strebitzer@magloft.com>

* feat: Add support for various CSV dialects and update documentation

Signed-off-by: Tobias Strebitzer <tobias.strebitzer@magloft.com>

* feat: Add validation for delimiters and tests for inconsistent csv files

Signed-off-by: Tobias Strebitzer <tobias.strebitzer@magloft.com>

---------

Signed-off-by: Tobias Strebitzer <tobias.strebitzer@magloft.com>
2025-02-14 08:55:09 +01:00

208 lines
7.7 KiB
Python

from io import BytesIO
from pathlib import Path
from docling.backend.pypdfium2_backend import PyPdfiumDocumentBackend
from docling.datamodel.base_models import DocumentStream, InputFormat
from docling.datamodel.document import InputDocument, _DocumentConversionInput
from docling.datamodel.settings import DocumentLimits
def test_in_doc_from_valid_path():
test_doc_path = Path("./tests/data/pdf/2206.01062.pdf")
doc = _make_input_doc(test_doc_path)
assert doc.valid == True
def test_in_doc_from_invalid_path():
test_doc_path = Path("./tests/does/not/exist.pdf")
doc = _make_input_doc(test_doc_path)
assert doc.valid == False
def test_in_doc_from_valid_buf():
buf = BytesIO(Path("./tests/data/pdf/2206.01062.pdf").open("rb").read())
stream = DocumentStream(name="my_doc.pdf", stream=buf)
doc = _make_input_doc_from_stream(stream)
assert doc.valid == True
def test_in_doc_from_invalid_buf():
buf = BytesIO(b"")
stream = DocumentStream(name="my_doc.pdf", stream=buf)
doc = _make_input_doc_from_stream(stream)
assert doc.valid == False
def test_in_doc_with_page_range():
test_doc_path = Path("./tests/data/pdf/2206.01062.pdf")
limits = DocumentLimits()
limits.page_range = (1, 10)
doc = InputDocument(
path_or_stream=test_doc_path,
format=InputFormat.PDF,
backend=PyPdfiumDocumentBackend,
limits=limits,
)
assert doc.valid == True
limits.page_range = (9, 9)
doc = InputDocument(
path_or_stream=test_doc_path,
format=InputFormat.PDF,
backend=PyPdfiumDocumentBackend,
limits=limits,
)
assert doc.valid == True
limits.page_range = (11, 12)
doc = InputDocument(
path_or_stream=test_doc_path,
format=InputFormat.PDF,
backend=PyPdfiumDocumentBackend,
limits=limits,
)
assert doc.valid == False
def test_guess_format(tmp_path):
"""Test docling.datamodel.document._DocumentConversionInput.__guess_format"""
dci = _DocumentConversionInput(path_or_stream_iterator=[])
temp_dir = tmp_path / "test_guess_format"
temp_dir.mkdir()
# Valid PDF
buf = BytesIO(Path("./tests/data/pdf/2206.01062.pdf").open("rb").read())
stream = DocumentStream(name="my_doc.pdf", stream=buf)
assert dci._guess_format(stream) == InputFormat.PDF
doc_path = Path("./tests/data/pdf/2206.01062.pdf")
assert dci._guess_format(doc_path) == InputFormat.PDF
# Valid MS Office
buf = BytesIO(Path("./tests/data/docx/lorem_ipsum.docx").open("rb").read())
stream = DocumentStream(name="lorem_ipsum.docx", stream=buf)
assert dci._guess_format(stream) == InputFormat.DOCX
doc_path = Path("./tests/data/docx/lorem_ipsum.docx")
assert dci._guess_format(doc_path) == InputFormat.DOCX
# Valid HTML
buf = BytesIO(Path("./tests/data/html/wiki_duck.html").open("rb").read())
stream = DocumentStream(name="wiki_duck.html", stream=buf)
assert dci._guess_format(stream) == InputFormat.HTML
doc_path = Path("./tests/data/html/wiki_duck.html")
assert dci._guess_format(doc_path) == InputFormat.HTML
# Valid MD
buf = BytesIO(Path("./tests/data/md/wiki.md").open("rb").read())
stream = DocumentStream(name="wiki.md", stream=buf)
assert dci._guess_format(stream) == InputFormat.MD
doc_path = Path("./tests/data/md/wiki.md")
assert dci._guess_format(doc_path) == InputFormat.MD
# Valid CSV
buf = BytesIO(Path("./tests/data/csv/csv-comma.csv").open("rb").read())
stream = DocumentStream(name="csv-comma.csv", stream=buf)
assert dci._guess_format(stream) == InputFormat.CSV
stream = DocumentStream(name="test-comma", stream=buf)
assert dci._guess_format(stream) == InputFormat.CSV
doc_path = Path("./tests/data/csv/csv-comma.csv")
assert dci._guess_format(doc_path) == InputFormat.CSV
# Valid XML USPTO patent
buf = BytesIO(Path("./tests/data/uspto/ipa20110039701.xml").open("rb").read())
stream = DocumentStream(name="ipa20110039701.xml", stream=buf)
assert dci._guess_format(stream) == InputFormat.XML_USPTO
doc_path = Path("./tests/data/uspto/ipa20110039701.xml")
assert dci._guess_format(doc_path) == InputFormat.XML_USPTO
buf = BytesIO(Path("./tests/data/uspto/pftaps057006474.txt").open("rb").read())
stream = DocumentStream(name="pftaps057006474.txt", stream=buf)
assert dci._guess_format(stream) == InputFormat.XML_USPTO
doc_path = Path("./tests/data/uspto/pftaps057006474.txt")
assert dci._guess_format(doc_path) == InputFormat.XML_USPTO
# Valid XML PubMed
buf = BytesIO(Path("./tests/data/pubmed/elife-56337.xml").open("rb").read())
stream = DocumentStream(name="elife-56337.xml", stream=buf)
assert dci._guess_format(stream) == InputFormat.XML_PUBMED
doc_path = Path("./tests/data/pubmed/elife-56337.xml")
assert dci._guess_format(doc_path) == InputFormat.XML_PUBMED
buf = BytesIO(Path("./tests/data/pubmed/elife-56337.nxml").open("rb").read())
stream = DocumentStream(name="elife-56337.nxml", stream=buf)
assert dci._guess_format(stream) == InputFormat.XML_PUBMED
doc_path = Path("./tests/data/pubmed/elife-56337.nxml")
assert dci._guess_format(doc_path) == InputFormat.XML_PUBMED
buf = BytesIO(Path("./tests/data/pubmed/elife-56337.txt").open("rb").read())
stream = DocumentStream(name="elife-56337.txt", stream=buf)
assert dci._guess_format(stream) == InputFormat.XML_PUBMED
doc_path = Path("./tests/data/pubmed/elife-56337.txt")
assert dci._guess_format(doc_path) == InputFormat.XML_PUBMED
# Valid XML, non-supported flavor
xml_content = (
'<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE docling_test SYSTEM '
'"test.dtd"><docling>Docling parses documents</docling>'
)
doc_path = temp_dir / "docling_test.xml"
doc_path.write_text(xml_content, encoding="utf-8")
assert dci._guess_format(doc_path) == None
buf = BytesIO(Path(doc_path).open("rb").read())
stream = DocumentStream(name="docling_test.xml", stream=buf)
assert dci._guess_format(stream) == None
# Invalid USPTO patent (as plain text)
stream = DocumentStream(name="pftaps057006474.txt", stream=BytesIO(b"xyz"))
assert dci._guess_format(stream) == None
doc_path = temp_dir / "pftaps_wrong.txt"
doc_path.write_text("xyz", encoding="utf-8")
assert dci._guess_format(doc_path) == None
# Valid Docling JSON
test_str = '{"name": ""}'
stream = DocumentStream(name="test.json", stream=BytesIO(f"{test_str}".encode()))
assert dci._guess_format(stream) == InputFormat.JSON_DOCLING
doc_path = temp_dir / "test.json"
doc_path.write_text(test_str, encoding="utf-8")
assert dci._guess_format(doc_path) == InputFormat.JSON_DOCLING
# Non-Docling JSON
# TODO: Docling JSON is currently the single supported JSON flavor and the pipeline
# will try to validate *any* JSON (based on suffix/MIME) as Docling JSON; proper
# disambiguation seen as part of https://github.com/DS4SD/docling/issues/802
test_str = "{}"
stream = DocumentStream(name="test.json", stream=BytesIO(f"{test_str}".encode()))
assert dci._guess_format(stream) == InputFormat.JSON_DOCLING
doc_path = temp_dir / "test.json"
doc_path.write_text(test_str, encoding="utf-8")
assert dci._guess_format(doc_path) == InputFormat.JSON_DOCLING
def _make_input_doc(path):
in_doc = InputDocument(
path_or_stream=path,
format=InputFormat.PDF,
backend=PyPdfiumDocumentBackend,
)
return in_doc
def _make_input_doc_from_stream(doc_stream):
in_doc = InputDocument(
path_or_stream=doc_stream.stream,
format=InputFormat.PDF,
filename=doc_stream.name,
backend=PyPdfiumDocumentBackend,
)
return in_doc