convert app to proper python package

backend/graphrag_app/api/data.py

@@ -13,13 +13,13 @@ from fastapi import (
     UploadFile,
 )
 
-from src.logger.load_logger import load_pipeline_logger
-from src.typing.models import (
+from graphrag_app.logger.load_logger import load_pipeline_logger
+from graphrag_app.typing.models import (
     BaseResponse,
     StorageNameList,
 )
-from src.utils.azure_clients import AzureClientManager
-from src.utils.common import (
+from graphrag_app.utils.azure_clients import AzureClientManager
+from graphrag_app.utils.common import (
     delete_blob_container,
     delete_cosmos_container_item,
     sanitize_name,

backend/graphrag_app/api/graph.py

@@ -7,9 +7,9 @@ from fastapi import (
 )
 from fastapi.responses import StreamingResponse
 
-from src.logger.load_logger import load_pipeline_logger
-from src.utils.azure_clients import AzureClientManager
-from src.utils.common import (
+from graphrag_app.logger.load_logger import load_pipeline_logger
+from graphrag_app.utils.azure_clients import AzureClientManager
+from graphrag_app.utils.common import (
     sanitize_name,
     validate_index_file_exist,
 )

backend/graphrag_app/api/index.py

@@ -18,20 +18,20 @@ from kubernetes import (
     config as kubernetes_config,
 )
 
-from src.logger.load_logger import load_pipeline_logger
-from src.typing.models import (
+from graphrag_app.logger.load_logger import load_pipeline_logger
+from graphrag_app.typing.models import (
     BaseResponse,
     IndexNameList,
     IndexStatusResponse,
 )
-from src.typing.pipeline import PipelineJobState
-from src.utils.azure_clients import AzureClientManager
-from src.utils.common import (
+from graphrag_app.typing.pipeline import PipelineJobState
+from graphrag_app.utils.azure_clients import AzureClientManager
+from graphrag_app.utils.common import (
     delete_blob_container,
     sanitize_name,
     validate_blob_container_name,
 )
-from src.utils.pipeline import PipelineJob
+from graphrag_app.utils.pipeline import PipelineJob
 
 index_route = APIRouter(
     prefix="/index",

backend/graphrag_app/api/prompt_tuning.py

@@ -13,9 +13,9 @@ from fastapi import (
 )
 from graphrag.config.create_graphrag_config import create_graphrag_config
 
-from src.logger.load_logger import load_pipeline_logger
-from src.utils.azure_clients import AzureClientManager
-from src.utils.common import sanitize_name
+from graphrag_app.logger.load_logger import load_pipeline_logger
+from graphrag_app.utils.azure_clients import AzureClientManager
+from graphrag_app.utils.common import sanitize_name
 
 prompt_tuning_route = APIRouter(prefix="/index/config", tags=["Index Configuration"])
 

backend/graphrag_app/api/query.py

@@ -25,19 +25,19 @@ from graphrag.vector_stores.base import (
     VectorStoreSearchResult,
 )
 
-from src.logger.load_logger import load_pipeline_logger
-from src.typing.models import (
+from graphrag_app.logger.load_logger import load_pipeline_logger
+from graphrag_app.typing.models import (
     GraphRequest,
     GraphResponse,
 )
-from src.typing.pipeline import PipelineJobState
-from src.utils.azure_clients import AzureClientManager
-from src.utils.common import (
+from graphrag_app.typing.pipeline import PipelineJobState
+from graphrag_app.utils.azure_clients import AzureClientManager
+from graphrag_app.utils.common import (
     get_df,
     sanitize_name,
     validate_index_file_exist,
 )
-from src.utils.pipeline import PipelineJob
+from graphrag_app.utils.pipeline import PipelineJob
 
 query_route = APIRouter(
     prefix="/query",

backend/graphrag_app/api/query_streaming.py

@@ -21,11 +21,11 @@ from graphrag.api.query import (
 )
 from graphrag.config import create_graphrag_config
 
-from src.api.query import _is_index_complete
-from src.logger.load_logger import load_pipeline_logger
-from src.typing.models import GraphRequest
-from src.utils.azure_clients import AzureClientManager
-from src.utils.common import (
+from graphrag_app.api.query import _is_index_complete
+from graphrag_app.logger.load_logger import load_pipeline_logger
+from graphrag_app.typing.models import GraphRequest
+from graphrag_app.utils.azure_clients import AzureClientManager
+from graphrag_app.utils.common import (
     get_df,
     sanitize_name,
     validate_index_file_exist,
@@ -45,7 +45,7 @@ query_streaming_route = APIRouter(
     description="The global query method generates answers by searching over all AI-generated community reports in a map-reduce fashion. This is a resource-intensive method, but often gives good responses for questions that require an understanding of the dataset as a whole.",
 )
 async def global_search_streaming(request: GraphRequest):
-    # this is a slightly modified version of src.api.query.global_query() method
+    # this is a slightly modified version of graphrag_app.api.query.global_query() method
     if isinstance(request.index_name, str):
         index_names = [request.index_name]
     else:
@@ -202,7 +202,7 @@ async def global_search_streaming(request: GraphRequest):
     description="The local query method generates answers by combining relevant data from the AI-extracted knowledge-graph with text chunks of the raw documents. This method is suitable for questions that require an understanding of specific entities mentioned in the documents (e.g. What are the healing properties of chamomile?).",
 )
 async def local_search_streaming(request: GraphRequest):
-    # this is a slightly modified version of src.api.query.local_query() method
+    # this is a slightly modified version of graphrag_app.api.query.local_query() method
     if isinstance(request.index_name, str):
         index_names = [request.index_name]
     else:

backend/graphrag_app/api/source.py

@@ -5,15 +5,15 @@
 import pandas as pd
 from fastapi import APIRouter, HTTPException
 
-from src.logger.load_logger import load_pipeline_logger
-from src.typing.models import (
+from graphrag_app.logger.load_logger import load_pipeline_logger
+from graphrag_app.typing.models import (
     ClaimResponse,
     EntityResponse,
     RelationshipResponse,
     ReportResponse,
     TextUnitResponse,
 )
-from src.utils.common import (
+from graphrag_app.utils.common import (
     pandas_storage_options,
     sanitize_name,
     validate_index_file_exist,

backend/graphrag_app/config/index-cronjob-manager.yaml

@@ -22,6 +22,7 @@ spec:
           containers:
             - name: index-job-manager
               image: PLACEHOLDER
+              workingDir: /backend/graphrag_app/config
               imagePullPolicy: Always
               resources:
                 requests:

backend/graphrag_app/config/manage-indexing-jobs.py

@@ -9,6 +9,7 @@ to schedule graphrag indexing jobs on a first-come-first-serve basis (based on e
 """
 
 import os
+from pathlib import Path
 
 import pandas as pd
 import yaml
@@ -17,11 +18,11 @@ from kubernetes import (
     config,
 )
 
-from src.logger.load_logger import load_pipeline_logger
-from src.typing.pipeline import PipelineJobState
-from src.utils.azure_clients import AzureClientManager
-from src.utils.common import sanitize_name
-from src.utils.pipeline import PipelineJob
+from graphrag_app.logger.load_logger import load_pipeline_logger
+from graphrag_app.typing.pipeline import PipelineJobState
+from graphrag_app.utils.azure_clients import AzureClientManager
+from graphrag_app.utils.common import sanitize_name
+from graphrag_app.utils.pipeline import PipelineJob
 
 
 def schedule_indexing_job(index_name: str):
@@ -68,14 +69,15 @@ def _generate_aks_job_manifest(
     The manifest must be valid YAML with certain values replaced by the provided arguments.
     """
     # NOTE: this file location is relative to the WORKDIR set in Dockerfile-backend
-    with open("index-job.yaml", "r") as f:
+    SCRIPT_DIR = Path(__file__).resolve().parent
+    with (SCRIPT_DIR / "config/index-job.yaml").open("r") as f:
         manifest = yaml.safe_load(f)
     manifest["metadata"]["name"] = f"indexing-job-{sanitize_name(index_name)}"
     manifest["spec"]["template"]["spec"]["serviceAccountName"] = service_account_name
     manifest["spec"]["template"]["spec"]["containers"][0]["image"] = docker_image_name
     manifest["spec"]["template"]["spec"]["containers"][0]["command"] = [
         "python",
-        "src/indexer/indexer.py",
+        "tools/indexer.py",
         f"-i={index_name}",
     ]
     return manifest

backend/graphrag_app/logger/__init__.py

@@ -1,13 +1,13 @@
 # Copyright (c) Microsoft Corporation.
 # Licensed under the MIT License.
 
-from src.logger.application_insights_workflow_callbacks import (
+from graphrag_app.logger.application_insights_workflow_callbacks import (
     ApplicationInsightsWorkflowCallbacks,
 )
-from src.logger.console_workflow_callbacks import ConsoleWorkflowCallbacks
-from src.logger.load_logger import load_pipeline_logger
-from src.logger.pipeline_job_updater import PipelineJobUpdater
-from src.logger.typing import (
+from graphrag_app.logger.console_workflow_callbacks import ConsoleWorkflowCallbacks
+from graphrag_app.logger.load_logger import load_pipeline_logger
+from graphrag_app.logger.pipeline_job_updater import PipelineJobUpdater
+from graphrag_app.logger.typing import (
     Logger,
     PipelineAppInsightsReportingConfig,
     PipelineReportingConfigTypes,

backend/graphrag_app/logger/load_logger.py

@@ -9,13 +9,13 @@ from graphrag.callbacks.file_workflow_callbacks import FileWorkflowCallbacks
 from graphrag.callbacks.workflow_callbacks import WorkflowCallbacks
 from graphrag.callbacks.workflow_callbacks_manager import WorkflowCallbacksManager
 
-from src.logger.application_insights_workflow_callbacks import (
+from graphrag_app.logger.application_insights_workflow_callbacks import (
     ApplicationInsightsWorkflowCallbacks,
 )
-from src.logger.blob_workflow_callbacks import BlobWorkflowCallbacks
-from src.logger.console_workflow_callbacks import ConsoleWorkflowCallbacks
-from src.logger.typing import Logger
-from src.utils.azure_clients import AzureClientManager
+from graphrag_app.logger.blob_workflow_callbacks import BlobWorkflowCallbacks
+from graphrag_app.logger.console_workflow_callbacks import ConsoleWorkflowCallbacks
+from graphrag_app.logger.typing import Logger
+from graphrag_app.utils.azure_clients import AzureClientManager
 
 
 def load_pipeline_logger(

backend/graphrag_app/logger/pipeline_job_updater.py

@@ -3,8 +3,8 @@
 
 from graphrag.callbacks.noop_workflow_callbacks import NoopWorkflowCallbacks
 
-from src.typing.pipeline import PipelineJobState
-from src.utils.pipeline import PipelineJob
+from graphrag_app.typing.pipeline import PipelineJobState
+from graphrag_app.utils.pipeline import PipelineJob
 
 
 class PipelineJobUpdater(NoopWorkflowCallbacks):

backend/graphrag_app/main.py

@@ -4,6 +4,7 @@
 import os
 import traceback
 from contextlib import asynccontextmanager
+from pathlib import Path
 
 import yaml
 from azure.cosmos import PartitionKey, ThroughputProperties
@@ -20,15 +21,15 @@ from kubernetes import (
     config,
 )
 
-from src.api.data import data_route
-from src.api.graph import graph_route
-from src.api.index import index_route
-from src.api.prompt_tuning import prompt_tuning_route
-from src.api.query import query_route
-from src.api.query_streaming import query_streaming_route
-from src.api.source import source_route
-from src.logger.load_logger import load_pipeline_logger
-from src.utils.azure_clients import AzureClientManager
+from graphrag_app.api.data import data_route
+from graphrag_app.api.graph import graph_route
+from graphrag_app.api.index import index_route
+from graphrag_app.api.prompt_tuning import prompt_tuning_route
+from graphrag_app.api.query import query_route
+from graphrag_app.api.query_streaming import query_streaming_route
+from graphrag_app.api.source import source_route
+from graphrag_app.logger.load_logger import load_pipeline_logger
+from graphrag_app.utils.azure_clients import AzureClientManager
 
 
 async def catch_all_exceptions_middleware(request: Request, call_next):
@@ -91,7 +92,8 @@ async def lifespan(app: FastAPI):
             name=pod_name, namespace=os.environ["AKS_NAMESPACE"]
         )
         # load the cronjob manifest template and update PLACEHOLDER values with correct values using the pod spec
-        with open("index-job-manager.yaml", "r") as f:
+        SCRIPT_DIR = Path(__file__).resolve().parent
+        with (SCRIPT_DIR / "config/index-cronjob-manager.yaml").open("r") as f:
             manifest = yaml.safe_load(f)
         manifest["spec"]["jobTemplate"]["spec"]["template"]["spec"]["containers"][0][
             "image"

backend/graphrag_app/utils/common.py

@@ -10,7 +10,7 @@ from azure.cosmos import exceptions
 from azure.identity import DefaultAzureCredential
 from fastapi import HTTPException
 
-from src.utils.azure_clients import AzureClientManager
+from graphrag_app.utils.azure_clients import AzureClientManager
 
 
 def get_df(

backend/graphrag_app/utils/pipeline.py

@@ -8,9 +8,9 @@ from typing import (
 
 from azure.cosmos.exceptions import CosmosHttpResponseError
 
-from src.typing.pipeline import PipelineJobState
-from src.utils.azure_clients import AzureClientManager
-from src.utils.common import sanitize_name
+from graphrag_app.typing.pipeline import PipelineJobState
+from graphrag_app.utils.azure_clients import AzureClientManager
+from graphrag_app.utils.common import sanitize_name
 
 
 @dataclass

backend/poetry.lock

@@ -1276,20 +1276,20 @@ files = [
 
 [[package]]
 name = "deprecated"
-version = "1.2.15"
+version = "1.2.17"
 description = "Python @deprecated decorator to deprecate old python classes, functions or methods."
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,>=2.7"
 files = [
-    {file = "Deprecated-1.2.15-py2.py3-none-any.whl", hash = "sha256:353bc4a8ac4bfc96800ddab349d89c25dec1079f65fd53acdcc1e0b975b21320"},
-    {file = "deprecated-1.2.15.tar.gz", hash = "sha256:683e561a90de76239796e6b6feac66b99030d2dd3fcf61ef996330f14bbb9b0d"},
+    {file = "Deprecated-1.2.17-py2.py3-none-any.whl", hash = "sha256:69cdc0a751671183f569495e2efb14baee4344b0236342eec29f1fde25d61818"},
+    {file = "deprecated-1.2.17.tar.gz", hash = "sha256:0114a10f0bbb750b90b2c2296c90cf7e9eaeb0abb5cf06c80de2c60138de0a82"},
 ]
 
 [package.dependencies]
 wrapt = ">=1.10,<2"
 
 [package.extras]
-dev = ["PyTest", "PyTest-Cov", "bump2version (<1)", "jinja2 (>=3.0.3,<3.1.0)", "setuptools", "sphinx (<2)", "tox"]
+dev = ["PyTest", "PyTest-Cov", "bump2version (<1)", "setuptools", "tox"]
 
 [[package]]
 name = "deprecation"
@@ -1613,61 +1613,61 @@ openai = ["openai (>=1.35.12)", "tiktoken (>=0.7.0)"]
 
 [[package]]
 name = "fonttools"
-version = "4.55.4"
+version = "4.55.6"
 description = "Tools to manipulate font files"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "fonttools-4.55.4-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:3b332ea7b7f5f3d99f9bc5a28a23c3824ae72711abf7c4e1d62fa21699fdebe7"},
-    {file = "fonttools-4.55.4-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:5d8f925909256e62152e7c3e192655dbca3ab8c3cdef7d7b436732727e80feb6"},
-    {file = "fonttools-4.55.4-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:1a58af9b98e39bcd773aa352b4512be79b472830b799cb1d3cafb2b4796b71cd"},
-    {file = "fonttools-4.55.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:736d750d2ab4523067d8058e5294b40b01f2eee521e0fd401bec0d5e21e80b12"},
-    {file = "fonttools-4.55.4-cp310-cp310-musllinux_1_2_aarch64.whl", hash = "sha256:1a9a2e7e8a9d3bfa9589db3e6c4e4c127fec252493924b2f87a67a25f9430057"},
-    {file = "fonttools-4.55.4-cp310-cp310-musllinux_1_2_x86_64.whl", hash = "sha256:87824368e994af34a95cb4279a8c711e51974b3c28d052d39d768531cc9e8e59"},
-    {file = "fonttools-4.55.4-cp310-cp310-win32.whl", hash = "sha256:6c36dcbfe64bce38c4d4f1d436cdc6445e969eee96eb98d98be603b5abf8c3f2"},
-    {file = "fonttools-4.55.4-cp310-cp310-win_amd64.whl", hash = "sha256:3c53a467e5cf629acdbefc98b0f554859539fb6447bbeae4117b9ab51464ccc5"},
-    {file = "fonttools-4.55.4-cp311-cp311-macosx_10_9_universal2.whl", hash = "sha256:1605b28165c785bf26c2cbd205dc0822463e3f9f56f187049eb214dc5f4a59cb"},
-    {file = "fonttools-4.55.4-cp311-cp311-macosx_10_9_x86_64.whl", hash = "sha256:d851d8b2fdb676507365d1430c3285d62c4039d0d7760d8cf2f2e5ea3aa19d73"},
-    {file = "fonttools-4.55.4-cp311-cp311-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:3fb3cf1cddf08cec0338f238f950cb76fabab23a324a579e3e1f9b2ef2578329"},
-    {file = "fonttools-4.55.4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:ddd3208b06186ca00fbd329c0d0fed5ba209c99017cc46e2c4ea42233c2fbd00"},
-    {file = "fonttools-4.55.4-cp311-cp311-musllinux_1_2_aarch64.whl", hash = "sha256:9bd98819cb585a894dda9dcb337afeb2601abf17da17de7bfbfc1bc2e4a062c7"},
-    {file = "fonttools-4.55.4-cp311-cp311-musllinux_1_2_x86_64.whl", hash = "sha256:4877376c10541e8dccf14876c8476d5082338fa5d21103894894382cc245144b"},
-    {file = "fonttools-4.55.4-cp311-cp311-win32.whl", hash = "sha256:3a5e466894ec6d8a009b0eb8e02a6eb26959a318d5b7a906280c26bdadce6423"},
-    {file = "fonttools-4.55.4-cp311-cp311-win_amd64.whl", hash = "sha256:f595129e6f9c6402965d6295fe8c18c1945d27af0f90bdb52ff426226e647afc"},
-    {file = "fonttools-4.55.4-cp312-cp312-macosx_10_13_universal2.whl", hash = "sha256:b3db72ad2d26a0e9ec694cbfb4485a8da9c095d29f66561cf935dbd19f3efcea"},
-    {file = "fonttools-4.55.4-cp312-cp312-macosx_10_13_x86_64.whl", hash = "sha256:87717808fd5953588c3ffaf512e8cab0e43c09c1da04e42ba87fa4c07d8170c7"},
-    {file = "fonttools-4.55.4-cp312-cp312-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:f49dac626ad5bc1a0147b88e6157e3211fd440d00007f0da6c9e5f91dd5cb88e"},
-    {file = "fonttools-4.55.4-cp312-cp312-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:a2d0ac8656ada8b604ae5da15d9aa075232f2181b95b51a3a2a55195222df7e7"},
-    {file = "fonttools-4.55.4-cp312-cp312-musllinux_1_2_aarch64.whl", hash = "sha256:013c8b45873fa77a4ff6d25e43fecf1046cb7e8c6b32f1843117f98f3f8eac60"},
-    {file = "fonttools-4.55.4-cp312-cp312-musllinux_1_2_x86_64.whl", hash = "sha256:94caad375d254a0332926512f06791f5e66c24a913ebecd6178b14f61d27c62f"},
-    {file = "fonttools-4.55.4-cp312-cp312-win32.whl", hash = "sha256:cb3eb4bf3a0c4e431e1ccab7a33ef4f1bb32657133fff4a61dc4fcbd54b94d29"},
-    {file = "fonttools-4.55.4-cp312-cp312-win_amd64.whl", hash = "sha256:6914269f6ff6b20c6b5a9b19d0b752880bd8ee218d9a7d6afe9960bbf1922d98"},
-    {file = "fonttools-4.55.4-cp313-cp313-macosx_10_13_universal2.whl", hash = "sha256:699dd32da7258a89939567a3d71b3f8decf84da54488a2526693f0d981a76479"},
-    {file = "fonttools-4.55.4-cp313-cp313-macosx_10_13_x86_64.whl", hash = "sha256:0f374b18ac04fbf78f20940418aee7882be3cdcb328ded80e16c3356499f64cf"},
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-    {file = "fonttools-4.55.4-cp313-cp313-musllinux_1_2_aarch64.whl", hash = "sha256:2695781a897395d03504fd24b60c944726b5e7b7af9ea3d922f7319d70c6fc37"},
-    {file = "fonttools-4.55.4-cp313-cp313-musllinux_1_2_x86_64.whl", hash = "sha256:21de3ef5b8e5361fd01d6aef2c09dda4ede139d6b3a1f5cf621d6bea48840dfd"},
-    {file = "fonttools-4.55.4-cp313-cp313-win32.whl", hash = "sha256:0ef33fda14e39aabb892a18ed16805b0b5b4e8a801fd1815a694be9dc7f30024"},
-    {file = "fonttools-4.55.4-cp313-cp313-win_amd64.whl", hash = "sha256:e953b1614e32b6da828ae7659c8f330a593b6c4b7a4a31f8f63c01b12f0d3680"},
-    {file = "fonttools-4.55.4-cp38-cp38-macosx_10_9_universal2.whl", hash = "sha256:e2d1bbcaf8ca8c60fbb029982197fbaa487559d5380f1c3098882c5ceb4311c7"},
-    {file = "fonttools-4.55.4-cp38-cp38-macosx_10_9_x86_64.whl", hash = "sha256:a885593dbcbfc250ff17831f7dc9316e95c3d046e6cd7ff7ab52ebf673bbf978"},
-    {file = "fonttools-4.55.4-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:02cd4ad9b3ab9f9c5b233b3bb6a96a036c9c0ef17487805b5e73cedf6439d188"},
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 [[package]]
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 [[package]]
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+version = "32.0.0"
 description = "Kubernetes python client"
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 python-versions = ">=3.6"
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 [package.dependencies]
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 [[package]]
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 [package.dependencies]
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 description = "Data validation using Python type hints"
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 python-versions = ">=3.8"
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 ]
 
 [package.dependencies]
@@ -5486,29 +5486,29 @@ pyasn1 = ">=0.1.3"
 
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+version = "0.9.3"
 description = "An extremely fast Python linter and code formatter, written in Rust."
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 python-versions = ">=3.7"
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 ]
 
 [[package]]
@@ -5754,13 +5754,13 @@ tests = ["cython", "littleutils", "pygments", "pytest", "typeguard"]
 
 [[package]]
 name = "starlette"
-version = "0.45.2"
+version = "0.45.3"
 description = "The little ASGI library that shines."
 optional = false
 python-versions = ">=3.9"
 files = [
-    {file = "starlette-0.45.2-py3-none-any.whl", hash = "sha256:4daec3356fb0cb1e723a5235e5beaf375d2259af27532958e2d79df549dad9da"},
-    {file = "starlette-0.45.2.tar.gz", hash = "sha256:bba1831d15ae5212b22feab2f218bab6ed3cd0fc2dc1d4442443bb1ee52260e0"},
+    {file = "starlette-0.45.3-py3-none-any.whl", hash = "sha256:dfb6d332576f136ec740296c7e8bb8c8a7125044e7c6da30744718880cdd059d"},
+    {file = "starlette-0.45.3.tar.gz", hash = "sha256:2cbcba2a75806f8a41c722141486f37c28e30a0921c5f6fe4346cb0dcee1302f"},
 ]
 
 [package.dependencies]

backend/pyproject.toml

@@ -9,11 +9,10 @@ authors = [
     "Shane Solomon <shane.solomon@microsoft.com>",
     "Kenny Zhang <zhangken@microsoft.com>",
 ]
-description = ""
+description = "A web API wrapper around the official GraphRAG library."
 license = "MIT"
-name = "graphrag-solution-accelerator"
-package-mode = false
-version = "1.0.1"
+name = "graphrag-app"
+version = "1.2.0"
 
 [tool.poetry.dependencies]
 python = "~3.10"

backend/tests/conftest.py

@@ -10,8 +10,8 @@ from azure.cosmos import CosmosClient, PartitionKey
 from azure.storage.blob import BlobServiceClient
 from fastapi.testclient import TestClient
 
-from src.main import app
-from src.utils.common import sanitize_name
+from graphrag_app.main import app
+from graphrag_app.utils.common import sanitize_name
 
 
 @pytest.fixture(scope="session")

backend/tests/integration/test_api_source.py

@@ -8,7 +8,7 @@ from fastapi.testclient import TestClient
 
 
 def test_get_report(container_with_index_files: str, client: TestClient):
-    """Test retrieving a report via the src.api.source.get_report_info() function."""
+    """Test retrieving a report via the graphrag_app.api.source.get_report_info() function."""
     # retrieve a report that exists
     response = client.get(f"/source/report/{container_with_index_files}/1")
     assert response.status_code == 200

backend/tests/integration/test_utils_pipeline.py

@@ -8,8 +8,8 @@ from typing import Generator
 
 import pytest
 
-from src.typing.pipeline import PipelineJobState
-from src.utils.pipeline import PipelineJob
+from graphrag_app.typing.pipeline import PipelineJobState
+from graphrag_app.utils.pipeline import PipelineJob
 
 
 @pytest.fixture()
@@ -42,7 +42,7 @@ def cosmos_index_job_entry(cosmos_client) -> Generator[str, None, None]:
 
 
 def test_pipeline_job_interface(cosmos_index_job_entry):
-    """Test the src.utils.pipeline.PipelineJob class interface."""
+    """Test the graphrag_app.utils.pipeline.PipelineJob class interface."""
     pipeline_job = PipelineJob()
 
     # test creating a new entry

backend/tests/unit/test_azure_clients.py

@@ -5,7 +5,7 @@ from azure.cosmos import CosmosClient
 from azure.storage.blob import BlobServiceClient
 from azure.storage.blob.aio import BlobServiceClient as BlobServiceClientAsync
 
-from src.utils.azure_clients import (
+from graphrag_app.utils.azure_clients import (
     AzureClientManager,
     _BlobServiceClientSingleton,
     _BlobServiceClientSingletonAsync,

backend/tests/unit/test_common.py

@@ -3,7 +3,7 @@
 
 import pytest
 
-from src.utils.common import (
+from graphrag_app.utils.common import (
     retrieve_original_blob_container_name,
     sanitize_name,
     validate_blob_container_name,
@@ -12,7 +12,7 @@ from src.utils.common import (
 
 
 def test_validate_blob_container_name():
-    """Test the src.utils.common.validate_blob_container_name function."""
+    """Test the graphrag_app.utils.common.validate_blob_container_name function."""
     # test valid container name
     assert validate_blob_container_name("validcontainername") is None
     # test invalid container name
@@ -33,7 +33,7 @@ def test_validate_blob_container_name():
 
 
 def test_retrieve_original_blob_container_name(container_with_graphml_file):
-    """Test the src.utils.common.retrieve_original_blob_container_name function."""
+    """Test the graphrag_app.utils.common.retrieve_original_blob_container_name function."""
     # test retrieving a valid container name
     original_name = container_with_graphml_file
     sanitized_name = sanitize_name(original_name)
@@ -43,7 +43,7 @@ def test_retrieve_original_blob_container_name(container_with_graphml_file):
 
 
 def test_validate_index_file_exist(container_with_graphml_file):
-    """Test the src.utils.common.validate_index_file_exist function."""
+    """Test the graphrag_app.utils.common.validate_index_file_exist function."""
     original_name = container_with_graphml_file
     sanitized_name = sanitize_name(original_name)
     # test with a valid index and valid file

backend/tests/unit/test_load_logger.py

@@ -2,13 +2,13 @@ from unittest.mock import patch
 
 import pytest
 
-from src.logger.load_logger import load_pipeline_logger
+from graphrag_app.logger.load_logger import load_pipeline_logger
 
 
 @pytest.fixture
 def mock_app_insights_workflow_callbacks():
     with patch(
-        "src.logger.application_insights_workflow_callbacks.ApplicationInsightsWorkflowCallbacks"
+        "graphrag_app.logger.application_insights_workflow_callbacks.ApplicationInsightsWorkflowCallbacks"
     ) as mock_app_insights_workflow_callbacks:
         yield mock_app_insights_workflow_callbacks
 
@@ -24,7 +24,7 @@ def mock_file_workflow_callbacks():
 @pytest.fixture
 def mock_blob_workflow_callbacks():
     with patch(
-        "src.logger.blob_workflow_callbacks.BlobWorkflowCallbacks"
+        "graphrag_app.logger.blob_workflow_callbacks.BlobWorkflowCallbacks"
     ) as mock_blob_workflow_callbacks:
         yield mock_blob_workflow_callbacks
 
@@ -32,7 +32,7 @@ def mock_blob_workflow_callbacks():
 @pytest.fixture
 def mock_console_workflow_callbacks():
     with patch(
-        "src.logger.console_workflow_callbacks.ConsoleWorkflowCallbacks"
+        "graphrag_app.logger.console_workflow_callbacks.ConsoleWorkflowCallbacks"
     ) as mock_console_workflow_callbacks:
         yield mock_console_workflow_callbacks
 

backend/tests/unit/test_logger_app_insights_callbacks.py

@@ -6,7 +6,7 @@ from unittest.mock import MagicMock, patch
 
 import pytest
 
-from src.logger.application_insights_workflow_callbacks import (
+from graphrag_app.logger.application_insights_workflow_callbacks import (
     ApplicationInsightsWorkflowCallbacks,
 )
 
@@ -14,7 +14,7 @@ from src.logger.application_insights_workflow_callbacks import (
 @pytest.fixture
 def mock_logger():
     with patch(
-        "src.logger.application_insights_workflow_callbacks.logging.getLogger"
+        "graphrag_app.logger.application_insights_workflow_callbacks.logging.getLogger"
     ) as mock_get_logger:
         mock_logger_instance = MagicMock(spec=logging.Logger)
         mock_get_logger.return_value = mock_logger_instance
@@ -24,7 +24,7 @@ def mock_logger():
 @pytest.fixture
 def workflow_callbacks(mock_logger):
     with patch(
-        "src.logger.application_insights_workflow_callbacks.ApplicationInsightsWorkflowCallbacks.__init__",
+        "graphrag_app.logger.application_insights_workflow_callbacks.ApplicationInsightsWorkflowCallbacks.__init__",
         return_value=None,
     ):
         instance = ApplicationInsightsWorkflowCallbacks()

backend/tests/unit/test_logger_blob_callbacks.py

@@ -5,13 +5,13 @@ from unittest.mock import patch
 
 import pytest
 
-from src.logger.blob_workflow_callbacks import BlobWorkflowCallbacks
+from graphrag_app.logger.blob_workflow_callbacks import BlobWorkflowCallbacks
 
 
 @pytest.fixture
 def mock_blob_service_client():
     with patch(
-        "src.logger.blob_workflow_callbacks.BlobServiceClient"
+        "graphrag_app.logger.blob_workflow_callbacks.BlobServiceClient"
     ) as mock_blob_service_client:
         yield mock_blob_service_client
 
@@ -19,7 +19,7 @@ def mock_blob_service_client():
 @pytest.fixture
 def workflow_callbacks(mock_blob_service_client):
     with patch(
-        "src.logger.blob_workflow_callbacks.BlobWorkflowCallbacks.__init__",
+        "graphrag_app.logger.blob_workflow_callbacks.BlobWorkflowCallbacks.__init__",
         return_value=None,
     ):
         instance = BlobWorkflowCallbacks()

backend/tests/unit/test_logger_console_callbacks.py

@@ -6,13 +6,13 @@ from unittest.mock import MagicMock, patch
 
 import pytest
 
-from src.logger.console_workflow_callbacks import ConsoleWorkflowCallbacks
+from graphrag_app.logger.console_workflow_callbacks import ConsoleWorkflowCallbacks
 
 
 @pytest.fixture
 def mock_logger():
     with patch(
-        "src.logger.console_workflow_callbacks.logging.getLogger"
+        "graphrag_app.logger.console_workflow_callbacks.logging.getLogger"
     ) as mock_get_logger:
         mock_logger_instance = MagicMock(spec=logging.Logger)
         mock_get_logger.return_value = mock_logger_instance
@@ -22,7 +22,7 @@ def mock_logger():
 @pytest.fixture
 def workflow_callbacks(mock_logger):
     with patch(
-        "src.logger.console_workflow_callbacks.ConsoleWorkflowCallbacks.__init__",
+        "graphrag_app.logger.console_workflow_callbacks.ConsoleWorkflowCallbacks.__init__",
         return_value=None,
     ):
         instance = ConsoleWorkflowCallbacks()

backend/tools/indexer.py

@@ -14,18 +14,17 @@ from graphrag.config.create_graphrag_config import create_graphrag_config
 from graphrag.index.create_pipeline_config import create_pipeline_config
 from graphrag.index.typing import PipelineRunResult
 
-from ...src.logger import (
+from graphrag_app.logger import (
     PipelineJobUpdater,
     load_pipeline_logger,
 )
-from ...src.typing.pipeline import PipelineJobState
-from ...src.utils.azure_clients import AzureClientManager
-from ...src.utils.common import sanitize_name
-from ...src.utils.pipeline import PipelineJob
+from graphrag_app.typing.pipeline import PipelineJobState
+from graphrag_app.utils.azure_clients import AzureClientManager
+from graphrag_app.utils.common import sanitize_name
+from graphrag_app.utils.pipeline import PipelineJob
 
 
 def start_indexing_job(index_name: str):
-    return 0
     print("Start indexing job...")
     # get sanitized name
     sanitized_index_name = sanitize_name(index_name)

docker/Dockerfile-backend

@@ -10,7 +10,6 @@ ENV GRAPHRAG_VERSION=v${GRAPHRAG_VERSION}
 ENV PIP_ROOT_USER_ACTION=ignore
 ENV PIP_DISABLE_PIP_VERSION_CHECK=1
 ENV SETUPTOOLS_USE_DISTUTILS=stdlib
-ENV PYTHONPATH=/backend
 ENV TIKTOKEN_CACHE_DIR=/opt/tiktoken_cache/
 
 COPY backend /backend
@@ -26,4 +25,4 @@ RUN python -c "import tiktoken; tiktoken.encoding_for_model('gpt-3.5-turbo'); ti
 
 WORKDIR /backend
 EXPOSE 80
-CMD ["uvicorn", "src.main:app", "--host", "0.0.0.0", "--port", "80"]
+CMD ["uvicorn", "graphrag_app.main:app", "--host", "0.0.0.0", "--port", "80"]