Chore/dependency cleanup (#1169)

* fix dependencies with deptry

* change order in pyproject.toml

* fix

* Dependency updates and cleanup

* Future required

---------

Co-authored-by: Florian Maas <fpgmaas@gmail.com>

.semversioner/next-release/patch-20240919185225554951.json

@@ -0,0 +1,4 @@
+{
+  "type": "patch",
+  "description": "Dependency update and cleanup"
+}

pyproject.toml

@@ -50,27 +50,23 @@ datashaper = "^0.0.49"
 azure-search-documents = "^11.4.0"
 lancedb = "^0.12.0"
 
-# Event Loops
-uvloop = { version = "^0.20.0", markers = "platform_system != 'Windows'" }
-nest-asyncio = { version = "^1.6.0", markers = "platform_system == 'Windows'" }
-
 # Async IO
 aiolimiter = "^1.1.0"
 aiofiles = "^24.1.0"
 
 # LLM
-openai = "^1.37.1"
+openai = "^1.46.1"
 nltk = "3.9.1"
 tiktoken = "^0.7.0"
 
 # Data-Sci
-numba = "0.60.0"
 numpy = "^1.25.2"
 graspologic = "^3.4.1"
 networkx = "^3"
-fastparquet = "^2024.2.0"
-# 1.13.0 was a footgun
-scipy = "1.12.0"
+pandas = "^2.2.2"
+matplotlib = "^3.9.0"
+pyarrow = "^15.0.0"
+umap-learn = "^0.5.6"
 
 # Configuration
 pyyaml = "^6.0.2"
@@ -80,12 +76,9 @@ python-dotenv = "^1.0.0"
 # Network
 tenacity = "^9.0.0"
 
-swifter = "^1.4.0"
 pydantic = "^2"
 rich = "^13.6.0"
-textual = "^0.78.0"
 devtools = "^0.12.2"
-
 typing-extensions = "^4.12.2"
 
 #Azure
@@ -93,21 +86,22 @@ azure-storage-blob = "^12.22.0"
 azure-identity = "^1.17.1"
 json-repair = "^0.28.4"
 
-future = "^1.0.0"
+future = "^1.0.0" # Needed until graspologic fixes their dependency
+
 [tool.poetry.group.dev.dependencies]
 coverage = "^7.6.0"
 ipykernel = "^6.29.4"
-jupyter = "^1.0.0"
+jupyter = "^1.1.1"
 nbconvert = "^7.16.3"
-poethepoet = "^0.27.0"
+poethepoet = "^0.28.0"
 pyright = "^1.1.371"
 pytest = "^8.3.2"
 pytest-asyncio = "^0.24.0"
 pytest-timeout = "^2.3.1"
-ruff = "^0.6.2"
+ruff = "^0.6.5"
 semversioner = "^2.0.3"
-
 update-toml = "^0.2.1"
+deptry = "^0.16.1"
 
 [build-system]
 requires = ["poetry-core>=1.0.0", "poetry-dynamic-versioning>=1.0.0,<2.0.0"]