16 Commits

Author SHA1 Message Date
Nathan Evans
e40476153d
Speed up smoke tests (#1736)
* Move verb tests to regular CI

* Clean up env vars

* Update smoke runtime expectations

* Rework artifact assertions

* Fix plural in name

* remove redundant artifact len check

* Remove redundant artifact len check

* Adjust graph output expectations

* Update community expectations

* Include all workflow output

* Adjust text unit expectations

* Adjust assertions per dataset

* Fix test config param name

* Update nan allowed for optional model fields

---------

Co-authored-by: Alonso Guevara <alonsog@microsoft.com>
2025-02-25 13:24:35 -08:00
KennyZhang1
1bbce33f42
Multi-index querying for API layer (#1644)
* added multi-global-query function header

* ported over code for merging dataframes

* added connection to global streaming api function

* added function header for update context helper

* implemented and incorperated update_context function

* Updated to make sure 'parent' column in final_communities gets incremented for multi index.

* first cut at multi_local_seach function

* several minor changes and fixes

* Updated multi index local search.

* Cleaned up code.

* fixed lambda function ruff errors

* fixed more ruff errors

* moved query api helpers to util file

* moved index api helpers to util file

* merged in code left out of conflict

* changed GraphRagConfig object to support lists of vector stores

* Updated with fixes for multi_local_search.

* Minor updates.

* Minor updates.

* Updates for ruff check.

* Minor updates.

* removed redundant vector_store_configs arg

* ruff formatting changes

* semversioner

* Minor fix.

* spellcheck fixes

* ruff

* test fix for cicd errors

* another test fix

* added explicit typing for ci tests

* added dict type check for vector_store during indexing

* more ruff fixes

* moved type check

* Removed streaming. Added multi drift and basic searches.

* Formatting changes.

* Updates for pyright.

* Update for ruff.

* Ruff formatted.

* first cut at fixing vector store typing errors

* got multi local search working with new config

* ruff and test fixes

* added fix for embeddings type error

* renamed multi index api functions

* ruff

* convert config model to dict[VectorStoreConfig]

* modified tests to support new vector_store model

* ruff fixes

* changed some test setups to match new model

* changed ci/cd settings files to match new structure

* Fix stderror check

* fixed bug in vector_store_config validation

* ruff

* add database_name field to vectorstoreconfig

* removed print statements

* small refactoring for PR comments

* modified default config in test

* modified vector store config unit test

---------

Co-authored-by: dorbaker <dorbaker@microsoft.com>
Co-authored-by: Alonso Guevara <alonsog@microsoft.com>
2025-01-27 17:26:38 -05:00
Derek Worthen
c644338bae
Refactor config (#1593)
* Refactor config

- Add new ModelConfig to represent LLM settings
    - Combines LLMParameters, ParallelizationParameters, encoding_model, and async_mode
- Add top level models config that is a list of available LLM ModelConfigs
- Remove LLMConfig inheritance and delete LLMConfig
    - Replace the inheritance with a model_id reference to the ModelConfig listed in the top level models config
- Remove all fallbacks and hydration logic from create_graphrag_config
    - This removes the automatic env variable overrides
- Support env variables within config files using Templating
    - This requires "$" to be escaped with extra "$" so ".*\\.txt$" becomes ".*\\.txt$$"
- Update init content to initialize new config file with the ModelConfig structure

* Use dict of ModelConfig instead of list

* Add model validations and unit tests

* Fix ruff checks

* Add semversioner change

* Fix unit tests

* validate root_dir in pydantic model

* Rename ModelConfig to LanguageModelConfig

* Rename ModelConfigMissingError to LanguageModelConfigMissingError

* Add validationg for unexpected API keys

* Allow skipping pydantic validation for testing/mocking purposes.

* Add default lm configs to verb tests

* smoke test

* remove config from flows to fix llm arg mapping

* Fix embedding llm arg mapping

* Remove timestamp from smoke test outputs

* Remove unused "subworkflows" smoke test properties

* Add models to smoke test configs

* Update smoke test output path

* Send logs to logs folder

* Fix output path

* Fix csv test file pattern

* Update placeholder

* Format

* Instantiate default model configs

* Fix unit tests for config defaults

* Fix migration notebook

* Remove create_pipeline_config

* Remove several unused config models

* Remove indexing embedding and input configs

* Move embeddings function to config

* Remove skip_workflows

* Remove skip embeddings in favor of explicit naming

* fix unit test spelling mistake

* self.models[model_id] is already a language model. Remove redundant casting.

* update validation errors to instruct users to rerun graphrag init

* instantiate LanguageModelConfigs with validation

* skip validation in unit tests

* update verb tests to use default model settings instead of skipping validation

* test using llm settings

* cleanup verb tests

* remove unsafe default model config

* remove the ability to skip pydantic validation

* remove None union types when default values are set

* move vector_store from embeddings to top level of config and delete resolve_paths

* update vector store settings

* fix vector store and smoke tests

* fix serializing vector_store settings

* fix vector_store usage

* fix vector_store type

* support cli overrides for loading graphrag config

* rename storage to output

* Add --force flag to init

* Remove run_id and resume, fix Drift config assignment

* Ruff

---------

Co-authored-by: Nathan Evans <github@talkswithnumbers.com>
Co-authored-by: Alonso Guevara <alonsog@microsoft.com>
2025-01-21 17:52:06 -06:00
dependabot[bot]
58f646a019
Bump ruff from 0.8.4 to 0.8.5 (#1579)
* Bump ruff from 0.8.4 to 0.8.5

Bumps [ruff](https://github.com/astral-sh/ruff) from 0.8.4 to 0.8.5.
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](https://github.com/astral-sh/ruff/compare/0.8.4...0.8.5)

---
updated-dependencies:
- dependency-name: ruff
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>

* Fix ruff

* Semver

* Another ruff

---------

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Alonso Guevara <alonsog@microsoft.com>
2025-01-02 17:45:52 -06:00
KennyZhang1
8368b12532
Add Cosmos DB storage/cache option (#1431)
* added cosmosdb constructor and database methods

* added rest of abstract method headers

* added cosmos db container methods

* implemented has and delete methods

* finished implementing abstract class methods

* integrated class into storage factory

* integrated cosmosdb class into cache factory

* added support for new config file fields

* replaced primary key cosmosdb initialization with connection strings

* modified cosmosdb setter to require json

* Fix non-default emitters

* Format

* Ruff

* ruff

* first successful run of cosmosdb indexing

* removed extraneous container_name setting

* require base_dir to be typed as str

* reverted merged changed from closed branch

* removed nested try statement

* readded initial non-parquet emitter fix

* added basic support for parquet emitter using internal conversions

* merged with main and resolved conflicts

* fixed more merge conflicts

* added cosmosdb functionality to query pipeline

* tested query for cosmosdb

* collapsed cosmosdb schema to use minimal containers and databases

* simplified create_database and create_container functions

* ruff fixes and semversioner

* spellcheck and ci fixes

* updated pyproject toml and lock file

* apply fixes after merge from main

* add temporary comments

* refactor cache factory

* refactored storage factory

* minor formatting

* update dictionary

* fix spellcheck typo

* fix default value

* fix pydantic model defaults

* update pydantic models

* fix init_content

* cleanup how factory passes parameters to file storage

* remove unnecessary output file type

* update pydantic model

* cleanup code

* implemented clear method

* fix merge from main

* add test stub for cosmosdb

* regenerate lock file

* modified set method to collapse parquet rows

* modified get method to collapse parquet rows

* updated has and delete methods and docstrings to adhere to new schema

* added prefix helper function

* replaced delimiter for prefixed id

* verified empty tests are passing

* fix merges from main

* add find test

* update cicd step name

* tested querying for new schema

* resolved errors from merge conflicts

* refactored set method to handle cache in new schema

* refactored get method to handle cache in new schema

* force unique ids to be written to cosmos for nodes

* found bug with has and delete methods

* modified has and delete to work with cache in new schema

* fix the merge from main

* minor typo fixes

* update lock file

* spellcheck fix

* fix init function signature

* minor formatting updates

* remove https protocol

* change localhost to 127.0.0.1 address

* update pytest to use bacj engine

* verified cache tests

* improved speed of has function

* resolved pytest error with find function

* added test for child method

* make container_name variable private as _container_name

* minor variable name fix

* cleanup cosmos pytest and make the cosmosdb storage class operations more efficient

* update cicd to use different cosmosdb emulator

* test with http protocol

* added pytest for clear()

* add longer timeout for cosmosdb emulator startup

* revert http connection back to https

* add comments to cicd code for future dev usage

* set to container and database clients to none upon deletion

* ruff changes

* add comments to cicd code

* removed unneeded None statements and ruff fixes

* more ruff fixes

* Update test_run.py

* remove unnecessary call to delete container

* ruff format updates

* Reverted test_run.py

* fix ruff formatter errors

* cleanup variable names to be more consistent

* remove extra semversioner file

* revert pydantic model changes

* revert pydantic model change

* revert pydantic model change

* re-enable inline formatting rule

* update documentation in dev guide

---------

Co-authored-by: Alonso Guevara <alonsog@microsoft.com>
Co-authored-by: Josh Bradley <joshbradley@microsoft.com>
2024-12-19 13:43:21 -06:00
Josh Bradley
823342188d
Cleanup factory methods (#1482)
* cleanup factory methods to have similar design pattern across codebase

* add semversioner file

* cleanup logging factory

* update developer guide

* add comment

* typo fix

* cleanup reporter terminology

* renmae reporter to logger

* fix comments

* update comment

* instantiate factory classes correctly and update index api callback parameter

---------

Co-authored-by: Alonso Guevara <alonsog@microsoft.com>
2024-12-10 16:11:11 -06:00
Alonso Guevara
1c3b0f34c3
Chore/lib updates (#1477)
* Update dependencies and fix issues

* Format

* Semver

* Fix Pyright

* Pyright

* More Pyright

* Pyright
2024-12-06 14:08:24 -06:00
Josh Bradley
dad2176b3c
Miscellaneous code cleanup procedures (#1452) 2024-11-27 13:27:43 -05:00
Alonso Guevara
d9f985ae52
Drift Search CLI, API, Docs and Example Notebook (#1348)
* Drift CLI and backwards compat

* Adding DRIFT Cli, Docs and example notebook

* Update tests and fix ruff

* Format

* Small cleanup

* Fix smoke tests

* Update notebook

* Oopsie fix

* Delete duplicate img
2024-11-05 12:05:19 -06:00
gaudyb
17658c5df8
New workflow to generate embeddings in a single workflow (#1296)
* New workflow to generate embeddings in a single workflow

* New workflow to generate embeddings in a single workflow

* version change

* clean tests without any embeddings references

* clean tests without any embeddings references

* remove code

* feedback implemented

* changes in logic

* feedback implemented

* store in table bug fixed

* smoke test for generate_text_embeddings workflow

* smoke test fix

* add generate_text_embeddings to the list of transient workflows

* smoke tests

* fix

* ruff formatting updates

* fix

* smoke test fixed

* smoke test fixed

* fix lancedb import

* smoke test fix

* ignore sorting

* smoke test fixed

* smoke test fixed

* check smoke test

* smoke test fixed

* change config for vector store

* format fix

* vector store changes

* revert debug profile back to empty filepath

* merge conflict solved

* merge conflict solved

* format fixed

* format fixed

* fix return dataframe

* snapshot fix

* format fix

* embeddings param implemented

* validation fixes

* fix map

* fix map

* fix properties

* config updates

* smoke test fixed

* settings change

* Update collection config and rework back-compat

* Repalce . with - for embedding store

---------

Co-authored-by: Alonso Guevara <alonsog@microsoft.com>
Co-authored-by: Josh Bradley <joshbradley@microsoft.com>
Co-authored-by: Nathan Evans <github@talkswithnumbers.com>
2024-11-01 15:01:35 -07:00
Josh Bradley
d6e6f5c077
Convert CLI to Typer app (#1305) 2024-10-24 14:22:32 -04:00
Nathan Evans
94f1e62e5c
Rework workflow architecture (#1311)
* Rename pipeline_storage file

* Add runtime storage option to context

* Fix import

* Switch to memory storage for runtime

* Infra for workflow runtime storage

* Migrate base_text_units to runtime storage

* Fix comment

* Semver

* Remove whitespace

* Remove subflow smoke tests and ignore transient artifacts

* Remove entity graph from transient list (not yet implemented)

* Increase smoke runtime allotment for create_base_entity_graph

* Revert format fix

* Remove noqa
2024-10-24 10:20:03 -07:00
Alonso Guevara
7fd23fa79c
Stabilize smoke tests for query community context building (#908)
* Stabilize smoke tests for query community context building

* Fix CODEOWNERS
2024-08-12 13:17:40 -06:00
Dayenne Souza
1e10bd342e
Re-enable smoke tests (#848)
* add smoke tests again

* add smoke tests separated action

* add patch version

* disable blob test

* blob conn again

* add file as cache type

* remove cache type enterely

* increase timeout

* remove comment

---------

Co-authored-by: Alonso Guevara <alonsog@microsoft.com>
2024-08-07 12:23:46 -06:00
Josh Bradley
2ddee65c29
Read/write files as binary utf-8 (#639) 2024-07-24 13:28:22 -04:00
Alonso Guevara
81b81cf60b Initial Release 2024-07-01 15:25:30 -06:00