graphrag/tests/verbs/util.py
Nathan Evans a35cb12741
Remove datashaper strip code (#1581)
Remove datashaper
2025-01-03 13:59:26 -08:00

61 lines
2.1 KiB
Python

# Copyright (c) 2024 Microsoft Corporation.
# Licensed under the MIT License
import pandas as pd
from pandas.testing import assert_series_equal
from graphrag.index.context import PipelineRunContext
from graphrag.index.run.utils import create_run_context
from graphrag.utils.storage import write_table_to_storage
pd.set_option("display.max_columns", None)
async def create_test_context(storage: list[str] | None = None) -> PipelineRunContext:
"""Create a test context with tables loaded into storage storage."""
context = create_run_context(None, None, None)
# always set the input docs
input = load_test_table("source_documents")
await write_table_to_storage(input, "input", context.storage)
if storage:
for name in storage:
table = load_test_table(name)
# normal storage interface insists on bytes
await write_table_to_storage(table, name, context.storage)
return context
def load_test_table(output: str) -> pd.DataFrame:
"""Pass in the workflow output (generally the workflow name)"""
return pd.read_parquet(f"tests/verbs/data/{output}.parquet")
def compare_outputs(
actual: pd.DataFrame, expected: pd.DataFrame, columns: list[str] | None = None
) -> None:
"""Compare the actual and expected dataframes, optionally specifying columns to compare.
This uses assert_series_equal since we are sometimes intentionally omitting columns from the actual output.
"""
cols = expected.columns if columns is None else columns
assert len(actual) == len(expected), (
f"Expected: {len(expected)} rows, Actual: {len(actual)} rows"
)
for column in cols:
assert column in actual.columns
try:
# dtypes can differ since the test data is read from parquet and our workflow runs in memory
assert_series_equal(
actual[column], expected[column], check_dtype=False, check_index=False
)
except AssertionError:
print("Expected:")
print(expected[column])
print("Actual:")
print(actual[column])
raise