* added core install and functionality of pinecone doc store (init, upsert, query, delete)
* implemented core functionality of Pinecone doc store
* Update Documentation & Code Style
* updated filtering to use Haystack filtering and reduced default batch_size
* Update Documentation & Code Style
* removed debugging code
* updated Pinecone filtering to use filter_utils
* removed uneeded methods and minor tweaks to current methods
* fixed typing issues
* Update Documentation & Code Style
* Allow filters in al methods except get_embedding_count
* Fix skipping document store tests
* Update Documentation & Code Style
* Fix handling of Milvus1 and Milvus2 in tests
* Update Documentation & Code Style
* Fix handling of Milvus1 and Milvus2 in tests
* Update Documentation & Code Style
* Remove SQL from tests requiring embeddings
* Update Documentation & Code Style
* Fix get_embedding_count of Milvus2
* Make sure to start Milvus2 tests with a new collection
* Add pinecone to test suite
* Update Documentation & Code Style
* Fix typing
* Update Documentation & Code Style
* Add pinecone to docstores dependendcy
* Add PineconeDocStore to API Documentation
* Add missing comma
* Update Documentation & Code Style
* Adapt format of doc strings
* Update Documentation & Code Style
* Set API key as environment variable
* Skip Pinecone tests in forks
* Add sleep after deleting index
* Add sleep after deleting index
* Add sleep after creating index
* Add check if index ready
* Remove printing of index stats
* Create new index for each pinecone test
* Use RestAPI instead of Python API for describe_index_stats
* Fix accessing describe_index_stats
* Remove usages of describe_index_stats
* Run pinecone tests separately
* Update Documentation & Code Style
* Add pdftotext to pinecone tests
* Remove sleep from doc store fixture
* Add describe_index_stats
* Remove unused imports
* Use pull_request_target trigger
* Revert use pull_request_target trigger
* Remove set_config
* Add os to conftest
* Integrate review comments
* Set include_values to False
* Remove quotation marks from pinecone.Index type
* Update Documentation & Code Style
* Update Documentation & Code Style
* Fix number of args in error messages
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* Similar test case seems to pass
* Update Documentation & Code Style
* Improve error message
* Slightly clarify info message
* Fix mismatch between node and node_class in the schema generation
* Remove condition that node class names cannot begin with Base and update tests
* Indentation
* Update Documentation & Code Style
* feedback
* Update Documentation & Code Style
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* add basic telemetry features
* change pipeline_config to _component_config
* Update Documentation & Code Style
* add super().__init__() calls to error classes
* make posthog mock work with python 3.7
* Update Documentation & Code Style
* update link to docs web page
* log exceptions, send event for raised HaystackErrors, refactor Path(CONFIG_PATH)
* add comment on send_event in BaseComponent.init() and fix mypy
* mock NonPrivateParameters and fix pylint undefined-variable
* Update Documentation & Code Style
* check model path contains multiple /
* add test for writing to file
* add test for en-/disable telemetry
* Update Documentation & Code Style
* merge file deletion methods and ignore pylint global statement
* Update Documentation & Code Style
* set env variable in demo to activate telemetry
* fix mock of HAYSTACK_TELEMETRY_ENABLED
* fix mypy and linter
* add CI as env variable to execution contexts
* remove threading, add test for custom error event
* Update Documentation & Code Style
* simplify config/log file deletion
* add test for final event being sent
* force writing config file in test
* make test compatible with python 3.7
* switch to posthog production server
* Update Documentation & Code Style
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* 'os' wrapper to function for brownfield support
* Changing function names and fixing default parameter values
* Including parameter keys
* Update Documentation & Code Style
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* Add BasePipeline.validate_config, BasePipeline.validate_yaml, and some new custom exception classes
* Make error composition work properly
* Clarify typing
* Help mypy a bit more
* Update Documentation & Code Style
* Enable autogenerated docs for Milvus1 and 2 separately
* Revert "Enable autogenerated docs for Milvus1 and 2 separately"
This reverts commit 282be4a78a6e95862a9b4c924fc3dea5ca71e28d.
* Update Documentation & Code Style
* Re-enable 'additionalProperties: False'
* Add pipeline.type to JSON Schema, was somehow forgotten
* Disable additionalProperties on the pipeline properties too
* Fix json-schemas for 1.1.0 and 1.2.0 (should not do it again in the future)
* Cal super in PipelineValidationError
* Improve _read_pipeline_config_from_yaml's error handling
* Fix generate_json_schema.py to include document stores
* Fix json schemas (retro-fix 1.1.0 again)
* Improve custom errors printing, add link to docs
* Add function in BaseComponent to list its subclasses in a module
* Make some document stores base classes abstract
* Add marker 'integration' in pytest flags
* Slighly improve validation of pipelines at load
* Adding tests for YAML loading and validation
* Make custom_query Optional for validation issues
* Fix bug in _read_pipeline_config_from_yaml
* Improve error handling in BasePipeline and Pipeline and add DAG check
* Move json schema generation into haystack/nodes/_json_schema.py (useful for tests)
* Simplify errors slightly
* Add some YAML validation tests
* Remove load_from_config from BasePipeline, it was never used anyway
* Improve tests
* Include json-schemas in package
* Fix conftest imports
* Make BasePipeline abstract
* Improve mocking by making the test independent from the YAML version
* Add exportable_to_yaml decorator to forget about set_config on mock nodes
* Fix mypy errors
* Comment out one monkeypatch
* Fix typing again
* Improve error message for validation
* Add required properties to pipelines
* Fix YAML version for REST API YAMLs to 1.2.0
* Fix load_from_yaml call in load_from_deepset_cloud
* fix HaystackError.__getattr__
* Add super().__init__()in most nodes and docstore, comment set_config
* Remove type from REST API pipelines
* Remove useless init from doc2answers
* Call super in Seq3SeqGenerator
* Typo in deepsetcloud.py
* Fix rest api indexing error mismatch and mock version of JSON schema in all tests
* Working on pipeline tests
* Improve errors printing slightly
* Add back test_pipeline.yaml
* _json_schema.py supports different versions with identical schemas
* Add type to 0.7 schema for backwards compatibility
* Fix small bug in _json_schema.py
* Try alternative to generate json schemas on the CI
* Update Documentation & Code Style
* Make linux CI match autoformat CI
* Fix super-init-not-called
* Accidentally committed file
* Update Documentation & Code Style
* fix test_summarizer_translation.py's import
* Mock YAML in a few suites, split and simplify test_pipeline_debug_and_validation.py::test_invalid_run_args
* Fix json schema for ray tests too
* Update Documentation & Code Style
* Reintroduce validation
* Usa unstable version in tests and rest api
* Make unstable support the latest versions
* Update Documentation & Code Style
* Remove needless fixture
* Make type in pipeline optional in the strings validation
* Fix schemas
* Fix string validation for pipeline type
* Improve validate_config_strings
* Remove type from test p[ipelines
* Update Documentation & Code Style
* Fix test_pipeline
* Removing more type from pipelines
* Temporary CI patc
* Fix issue with exportable_to_yaml never invoking the wrapped init
* rm stray file
* pipeline tests are green again
* Linux CI now needs .[all] to generate the schema
* Bugfixes, pipeline tests seems to be green
* Typo in version after merge
* Implement missing methods in Weaviate
* Trying to avoid FAISS tests from running in the Milvus1 test suite
* Fix some stray test paths and faiss index dumping
* Fix pytest markers list
* Temporarily disable cache to be able to see tests failures
* Fix pyproject.toml syntax
* Use only tmp_path
* Fix preprocessor signature after merge
* Fix faiss bug
* Fix Ray test
* Fix documentation issue by removing quotes from faiss type
* Update Documentation & Code Style
* use document properly in preprocessor tests
* Update Documentation & Code Style
* make preprocessor capable of handling documents
* import document
* Revert support for documents in preprocessor, do later
* Fix bug in _json_schema.py that was breaking validation
* re-enable cache
* Update Documentation & Code Style
* Simplify calling _json_schema.py from the CI
* Remove redundant ABC inheritance
* Ensure exportable_to_yaml works only on implementations
* Rename subclass to class_ in Meta
* Make run() and get_config() abstract in BasePipeline
* Revert unintended change in preprocessor
* Move outgoing_edges_input_node check inside try block
* Rename VALID_CODE_GEN_INPUT_REGEX into VALID_INPUT_REGEX
* Add check for a RecursionError on validate_config_strings
* Address usages of _pipeline_config in data silo and elasticsearch
* Rename _pipeline_config into _init_parameters
* Fix pytest marker and remove unused imports
* Remove most redundant ABCs
* Rename _init_parameters into _component_configuration
* Remove set_config and type from _component_configuration's dict
* Remove last instances of set_config and replace with super().__init__()
* Implement __init_subclass__ approach
* Simplify checks on the existence of _component_configuration
* Fix faiss issue
* Dynamic generation of node schemas & weed out old schemas
* Add debatable test
* Add docstring to debatable test
* Positive diff between schemas implemented
* Improve diff printing
* Rename REST API YAML files to trigger IDE validation
* Fix typing issues
* Fix more typing
* Typo in YAML filename
* Remove needless type:ignore
* Add tests
* Fix tests & validation feedback for accessory classes in custom nodes
* Refactor RAGeneratorType out
* Fix broken import in conftest
* Improve source error handling
* Remove unused import in test_eval.py breaking tests
* Fix changed error message in tests matches too
* Normalize generate_openapi_specs.py and generate_json_schema.py in the actions
* Fix path to generate_openapi_specs.py in autoformat.yml
* Update Documentation & Code Style
* Add test for FAISSDocumentStore-like situations (superclass with init params)
* Update Documentation & Code Style
* Fix indentation
* Remove commented set_config
* Store model_name_or_path in FARMReader to use in DistillationDataSilo
* Rename _component_configuration into _component_config
* Update Documentation & Code Style
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* Bring back init defs to api in v1.2
* Update Documentation & Code Style
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* update remaining occurences of get_connection
* fix milvus2 import and fix wrong extra references
* change MilvusDocumentStore to Milvus1DocumentStore
* update milvus docstrings to reflect updated dependency management
* enable milvus 2 tests
* fix milvus2 env variable processing
* fix dropping collections for each milvus 2 test
* make Milvus 2 doc store tests work
* allow user to specify consistency level
* Fist attempt at running Milvus2 in the CI
* Install the correct pymilvus
* add batch deletion for milvus2
* change default from milvus 1 to milvus 2
* make milvus2 the default in the docstores extra
* Switch milvus1 and milvus2 in base test run on CI
* Rename docstore flags for pytest: 'milvus'->'milvus1', 'milvus2'->'milvus'
* Rename milvus.py->milvus1.py and milvus2x.py->milvus2.py
* Enable autogenerated docs for Milvus1 and 2 separately
* Partial fix to docstring of Milvus2DocumentStore
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* add filter classes
* update filter comments
* Add util classes for converting filters (#2123)
* Apply Black
* reintroduce eval functions to filter ops
* Update documentation
* update to latest pymilvus version
* Apply Black
* fixing type hints
* Apply Black
* update write_documents method of milvus2 doc store
* remove unnecessary method
* update init
* remove changes to milvus 2 as they are part of other PR
* remove changes to milvus 2 as they are part of other PR
* updating doc strings to match elastic search filter doc
* Update Documentation & Code Style
* add support for case where there is no meta data defined for key
* update behaviour in case of field not existing in entry
* Update Documentation & Code Style
* add test for InMemoryDocumentStore extended meta data filtering
* make type hint more precise
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* Add versions of the the openapi.json file for versioned documentation
* Update Documentation & Code Style
* Use .suffix for extension check
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* Make YAML files get the same version as Haystack and throw warning at load in case of mismatch
* Update version of most YAMLs in the codebase (aesthethic chamge, only to avoid the warning).
* Remove quotes from version in tests
* Fix version in generate_json_schema.py
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* Trigger Black (@ZanSara on external account)
* Trigger Black again
* Update Documentation & Code Style
* Add image of how it looks from the contributor's side
* Add screenshot of the check to enable maintainer's access to the fork
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* Add explicit reference to repo name to allow CI to push code back
* Run test matrix only on tested code changes
* Isolate the bot to check if it works
* Clarify situation with a comment
* Simplify autoformat.yml
* Add code and docs check
* Add git pull to make sure to fetch changes if they were created
* Add cache to autoformat.yml too
* Add information on forks in CONTRIBUTING.md
* Add a not about code quality tools in CONTRIBUTING.md
* Add image file types to the CI exclusion list
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* Handle no answers and no documents scenarios in '_process_request'
* Fix tests
* Change return type in '_process_request'
* Return to use dicts
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* Apply filter in eval only if no gold documents are given as input
* change type annotation of input documents in eval
* Update Documentation & Code Style
* fix mypy
* Update Documentation & Code Style
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* Add DELETE /feedback for testing and make the ID generate server-side
* Make sure to delete only user generated labels
* Reduce fixture scope, was too broad
* Make test a bit more generic
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* join node should allow reciprocal rank fusion
* Update Documentation & Code Style
* add missing merging mode
* tuples are immutable
* take correct results from pipeline
* Update Documentation & Code Style
* Simple docstrings, use ValueError
* Use K=60
* Minor refactoring
* precalculate expected result in test
* Update Documentation & Code Style
* refactor to make more clear
* rm unused imports
* tests should test only one thing
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* Make mypy check also ui and rest_api, fix ui
* Remove explicit type packages from extras, mypy now downloads them
* Make pylint and mypy run on every file except tests
* Rename tasks
* Change cache key
* Fix mypy errors in rest_api
* Normalize python versions to avoid cache misses
* Add all exclusions to make pylint pass
* Run mypy on rest_api and ui as well
* test if installing the package really changes outcome
* Comment out installation of packages
* Experiment: randomize tests
* Add fallback installation steps on cache misses
* Remove randomization
* Add comment on cache
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* pass documents as extra param to eval
* pass documents via labels to eval
* rename param in docs
* Update Documentation & Code Style
* Revert "rename param in docs"
This reverts commit 2f4c2ec79575e9dd33a8300785f789a327df36f4.
* Revert "pass documents via labels to eval"
This reverts commit dcc51e41f2637d093d81c7d193b873c17c36b174.
* simplify iterating through labels and docs
* Update Documentation & Code Style
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* Upgrade pydoc-markdown and fix the YAMLs to work with it
* Pin pydoc-markdown to major version
* Generalize pydoc-markdown workflow
* Make a single Action to perform all tasks that require committing into the local branch
* Merge the code updates and the docs in the Linux CI to prevent the bot from always show the pipeline as green
* Installing Jupyter deps for Black
* Build cache before running generation tasks
* Add check not to run the code generation on master
* Simplify push action
* Add more test deps in setup.cfg and remove from GH Action workflow
* Remove forced upgrades on pip install
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* add filters attribute to labels and use in eval
* Add latest docstring and tutorial changes
* overwrite params if None
* populate filters from Label to MultiLabel
* add query_id in eval df and deepcopy params for each label
* fix mypy
* add test for aggregating filters in multilabel
* use query ids also in answers df
* loop through unique query_ids
* hash filters and query text as id
* Add latest docstring and tutorial changes
* fix top_k reader eval
* Apply Black
* rename query_id to id/multilabel_id
* Apply Black
* json dump filters in dataframe
* add filters and id to wrong_examples()
* Apply Black
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* Testing black on ui/
* Applying black on docstores
* Add latest docstring and tutorial changes
* Create a single GH action for Black and docs to reduce commit noise to the minimum, slightly refactor the OpenAPI action too
* Remove comments
* Relax constraints on pydoc-markdown
* Split temporary black from the docs. Pydoc-markdown was obsolete and needs a separate PR to upgrade
* Fix a couple of bugs
* Add a type: ignore that was missing somehow
* Give path to black
* Apply Black
* Apply Black
* Relocate a couple of type: ignore
* Update documentation
* Make Linux CI run after applying Black
* Triggering Black
* Apply Black
* Remove dependency, does not work well
* Remove manually double trailing commas
* Update documentation
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* 🎨 Update type annotations to allow their extraction for JSON Schema
* ✨ Add main script doing all the work to generate the JSON Schema
* ➕ Add GitHub Action dependency to generate JSON Schema
* ✨ Update JSON Schema generation script to allow easily generating the schema without making a PR
* 👷 Add GitHub Action to generate JSON Schema
* 💚 Fix CI GitHub Action
* 💚 Update GitHub Action environment variables
* ✨ Add initial JSON Schema
* Add latest docstring and tutorial changes
* 🐛 Do not allow extra params not defined in each model
* ♻️ Make any additional properties invalid
* ✨ Make other additional properties invalid in all the levels in pipelines
* ♻️ Do not include Base classes as possible nodes
* 🍱 Update JSON Schema
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* provide option to recreate es doc store on initialization
* Add latest docstring and tutorial changes
* Label expects more arguments
* Label expects also an answer
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* Add docstrings to the REST API endpoint to have them included in the OpenAPI specs
* Attempt at make GitHub CI generate the OpenAPI specs
* Missing __init__.py was breaking rest_api import
* Add comment on dummy pipeline
* Create separate workflow file for the OpenAPI specs generation
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