haystack/.github/workflows/linux_ci.yml
Sara Zan d470b9d0bd
Improve dependency management (#1994)
* Fist attempt at using setup.cfg for dependency management

* Trying the new package on the CI and in Docker too

* Add composite extras_require

* Add the safe_import function for document store imports and add some try-catch statements on rest_api and ui imports

* Fix bug on class import and rephrase error message

* Introduce typing for optional modules and add type: ignore in sparse.py

* Include importlib_metadata backport for py3.7

* Add colab group to extra_requires

* Fix pillow version

* Fix grpcio

* Separate out the crawler as another extra

* Make paths relative in rest_api and ui

* Update the test matrix in the CI

* Add try catch statements around the optional imports too to account for direct imports

* Never mix direct deps with self-references and add ES deps to the base install

* Refactor several paths in tests to make them insensitive to the execution path

* Include tstadel review and re-introduce Milvus1 in the tests suite, to fix

* Wrap pdf conversion utils into safe_import

* Update some tutorials and rever Milvus1 as default for now, see #2067

* Fix mypy config


Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
2022-01-26 18:12:55 +01:00

103 lines
3.6 KiB
YAML

name: Linux CI
on:
workflow_dispatch:
push:
branches: [ master ]
pull_request:
branches: [ master ]
jobs:
type-check:
runs-on: ubuntu-20.04
steps:
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
with:
python-version: 3.8
- name: Test with mypy
run: |
pip install mypy==0.910 types-Markdown types-requests types-PyYAML pydantic
mypy haystack
build-cache:
needs: type-check
runs-on: ubuntu-20.04
steps:
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
with:
python-version: 3.7
- run: echo "date=$(date +'%Y-%m-%d')" >> $GITHUB_ENV
- name: Cache
id: cache-python-env
uses: actions/cache@v2
with:
path: ${{ env.pythonLocation }}
key: linux-${{ env.pythonLocation }}-${{ env.date }}-${{ hashFiles('setup.py') }}-${{ hashFiles('setup.cfg') }}-${{ hashFiles('pyproject.toml') }}
- name: Install dependencies
if: steps.cache-python-env.outputs.cache-hit != 'true'
run: |
python -m pip install --upgrade pip
pip install --upgrade --upgrade-strategy eager .[test]
pip install torch-scatter -f https://data.pyg.org/whl/torch-1.10.0+cpu.html
prepare-build:
needs: build-cache
runs-on: ubuntu-20.04
steps:
- uses: actions/checkout@v2
- id: set-matrix
run: |
echo "::set-output name=matrix::$(find $(find . -type d -name test -not -path "./*env*/*") -type f -name test_*.py | jq -SR . | jq -cs .)"
outputs:
matrix: ${{ steps.set-matrix.outputs.matrix }}
build:
needs: prepare-build
runs-on: ubuntu-20.04
strategy:
matrix:
test-path: ${{fromJson(needs.prepare-build.outputs.matrix)}}
fail-fast: false
steps:
- uses: actions/checkout@v2
- name: Set up Python 3.7
uses: actions/setup-python@v2
with:
python-version: 3.7
- run: echo "date=$(date +'%Y-%m-%d')" >> $GITHUB_ENV
- name: Cache
uses: actions/cache@v2
with:
path: ${{ env.pythonLocation }}
key: linux-${{ env.pythonLocation }}-${{ env.date }}-${{ hashFiles('setup.py') }}-${{ hashFiles('setup.cfg') }}-${{ hashFiles('pyproject.toml') }}
- name: Run Elasticsearch
run: docker run -d -p 9200:9200 -e "discovery.type=single-node" -e "ES_JAVA_OPTS=-Xms128m -Xmx128m" elasticsearch:7.9.2
- name: Run Milvus
run: docker run -d -p 19530:19530 -p 19121:19121 milvusdb/milvus:1.1.0-cpu-d050721-5e559c
- name: Run Weaviate
run: docker run -d -p 8080:8080 --name haystack_test_weaviate --env AUTHENTICATION_ANONYMOUS_ACCESS_ENABLED='true' --env PERSISTENCE_DATA_PATH='/var/lib/weaviate' semitechnologies/weaviate:1.7.2
- name: Run GraphDB
run: docker run -d -p 7200:7200 --name haystack_test_graphdb deepset/graphdb-free:9.4.1-adoptopenjdk11
- name: Run Apache Tika
run: docker run -d -p 9998:9998 -e "TIKA_CHILD_JAVA_OPTS=-JXms128m" -e "TIKA_CHILD_JAVA_OPTS=-JXmx128m" apache/tika:1.24.1
- name: Run Parsr
run: docker run -d -p 3001:3001 axarev/parsr:v1.2.2
# - name: Run Ray
# run: RAY_DISABLE_MEMORY_MONITOR=1 ray start --head
- name: Install pdftotext
run: wget --no-check-certificate https://dl.xpdfreader.com/xpdf-tools-linux-4.03.tar.gz && tar -xvf xpdf-tools-linux-4.03.tar.gz && sudo cp xpdf-tools-linux-4.03/bin64/pdftotext /usr/local/bin
- name: Install tesseract
run: sudo apt-get install tesseract-ocr libtesseract-dev poppler-utils
- name: Run tests
run: pytest -s ${{ matrix.test-path }}