mirror of
https://github.com/deepset-ai/haystack.git
synced 2025-12-31 00:57:37 +00:00
694 lines
21 KiB
YAML
694 lines
21 KiB
YAML
name: Tests
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on:
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workflow_dispatch: # Activate this workflow manually
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push:
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branches:
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- main
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# release branches have the form v1.9.x
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- 'v[0-9].*[0-9].x'
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pull_request:
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types:
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- opened
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- reopened
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- synchronize
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- ready_for_review
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paths:
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- "**.py"
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- "pyproject.toml"
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- "!.github/**/*.py"
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- "!rest_api/**/*.py"
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env:
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HAYSTACK_TELEMETRY_VERSION: "0" # Disables telemetry
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PYTEST_PARAMS: --maxfail=5 --durations=10 --suppress-no-test-exit-code
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SLACK_WEBHOOK_URL: ${{ secrets.SLACK_WEBHOOK_URL }}
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SUITES_EXCLUDED_FROM_WINDOWS:
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--ignore=test/pipelines/test_ray.py
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--ignore=test/document_stores/test_knowledge_graph.py
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--ignore=test/nodes/test_audio.py
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--ignore=test/nodes/test_summarizer_translation.py
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--ignore=test/nodes/test_summarizer.py
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OPENAI_API_KEY: ${{ secrets.OPENAI_API_KEY }}
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COHERE_API_KEY: ${{ secrets.COHERE_API_KEY }}
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jobs:
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black:
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v3
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- uses: actions/setup-python@v4
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- name: Install Black
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run: |
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pip install --upgrade pip
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pip install .[formatting]
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- name: Check status
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run: |
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if ! black . --check; then
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git status
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echo "###################################################################################################"
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echo "# "
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echo "# CHECK FAILED! Black found issues with your code formatting."
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echo "# "
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echo "# Either:"
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echo "# 1. Run Black locally before committing:"
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echo "# "
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echo "# pip install .[formatting]"
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echo "# black ."
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echo "# "
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echo "# 2. Install the pre-commit hook:"
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echo "# "
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echo "# pre-commit install --hook-type pre-push"
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echo "# "
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echo "# 3. See https://github.com/deepset-ai/haystack/blob/main/CONTRIBUTING.md for help."
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echo "# "
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echo "# If you have further problems, please open an issue: https://github.com/deepset-ai/haystack/issues"
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echo "# "
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echo "##################################################################################################"
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exit 1
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fi
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- uses: act10ns/slack@v2
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with:
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status: ${{ job.status }}
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channel: '#haystack'
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if: failure() && github.ref == 'refs/heads/main'
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unit-tests:
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name: Unit / ${{ matrix.topic }} / ${{ matrix.os }}
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needs: black
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strategy:
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fail-fast: false
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matrix:
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os:
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- ubuntu-latest
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- windows-latest
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- macos-latest
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topic:
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- document_stores
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- nodes
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- agents
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runs-on: ${{ matrix.os }}
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steps:
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- uses: actions/checkout@v3
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- name: Setup Python
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uses: ./.github/actions/python_cache/
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- name: Install Haystack
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run: pip install .[all]
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- name: Run
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run: pytest -m "unit" test/${{ matrix.topic }}
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- uses: act10ns/slack@v2
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with:
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status: ${{ job.status }}
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channel: '#haystack'
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if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
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integration-tests-elasticsearch:
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name: Integration / Elasticsearch / ${{ matrix.os }}
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needs:
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- unit-tests
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strategy:
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fail-fast: false
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matrix:
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os: [ubuntu-latest]
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runs-on: ${{ matrix.os }}
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services:
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elasticsearch:
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image: elasticsearch:7.17.6
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env:
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discovery.type: "single-node"
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ES_JAVA_OPTS: "-Xms128m -Xmx256m"
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ports:
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- 9200:9200
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steps:
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- uses: actions/checkout@v3
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- name: Setup Python
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uses: ./.github/actions/python_cache/
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- name: Install Haystack
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run: pip install -U .[docstores]
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- name: Run tests
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run: |
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pytest --maxfail=5 -m "document_store and integration" test/document_stores/test_elasticsearch.py
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- uses: act10ns/slack@v2
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with:
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status: ${{ job.status }}
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channel: '#haystack'
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if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
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integration-tests-sql:
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name: Integration / SQL / ${{ matrix.os }}
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needs:
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- unit-tests
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strategy:
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fail-fast: false
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matrix:
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os: [ubuntu-latest,macos-latest,windows-latest]
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runs-on: ${{ matrix.os }}
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steps:
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- uses: actions/checkout@v3
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- name: Setup Python
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uses: ./.github/actions/python_cache/
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- name: Install Haystack
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run: pip install -U .[sql]
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- name: Run tests
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run: |
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pytest --maxfail=5 -m "document_store and integration" test/document_stores/test_sql.py
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- uses: act10ns/slack@v2
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with:
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status: ${{ job.status }}
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channel: '#haystack'
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if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
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integration-tests-opensearch:
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name: Integration / Opensearch / ${{ matrix.os }}
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needs:
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- unit-tests
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strategy:
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fail-fast: false
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matrix:
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os: [ubuntu-latest]
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runs-on: ${{ matrix.os }}
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services:
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opensearch:
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image: opensearchproject/opensearch:1.3.5
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env:
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discovery.type: "single-node"
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ES_JAVA_OPTS: "-Xms128m -Xmx256m"
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ports:
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- 9200:9200
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steps:
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- uses: actions/checkout@v3
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- name: Setup Python
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uses: ./.github/actions/python_cache/
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- name: Install Haystack
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run: pip install -U .[docstores]
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- name: Run tests
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run: |
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pytest --maxfail=5 -m "document_store and integration" test/document_stores/test_opensearch.py
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- uses: act10ns/slack@v2
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with:
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status: ${{ job.status }}
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channel: '#haystack'
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if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
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integration-tests-dc:
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name: Integration / dC / ${{ matrix.os }}
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needs:
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- unit-tests
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strategy:
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fail-fast: false
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matrix:
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os: [ubuntu-latest,macos-latest,windows-latest]
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runs-on: ${{ matrix.os }}
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steps:
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- uses: actions/checkout@v3
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- name: Setup Python
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uses: ./.github/actions/python_cache/
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- name: Install Haystack
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run: pip install -U .
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- name: Run tests
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run: |
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pytest --maxfail=5 -m "document_store and integration" test/document_stores/test_deepsetcloud.py
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- uses: act10ns/slack@v2
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with:
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status: ${{ job.status }}
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channel: '#haystack'
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if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
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integration-tests-faiss:
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name: Integration / faiss / ${{ matrix.os }}
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needs:
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- unit-tests
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strategy:
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fail-fast: false
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matrix:
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os: [ubuntu-latest,macos-latest,windows-latest]
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runs-on: ${{ matrix.os }}
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steps:
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- uses: actions/checkout@v3
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- name: Setup Python
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uses: ./.github/actions/python_cache/
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- name: Install Haystack
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run: pip install -U .
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- name: Run tests
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run: |
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pytest --maxfail=5 -m "document_store and integration" test/document_stores/test_faiss.py
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- uses: act10ns/slack@v2
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with:
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status: ${{ job.status }}
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channel: '#haystack'
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if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
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integration-tests-weaviate:
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name: Integration / Weaviate / ${{ matrix.os }}
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needs:
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- unit-tests
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strategy:
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fail-fast: false
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matrix:
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os: [ubuntu-latest]
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runs-on: ${{ matrix.os }}
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services:
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weaviate:
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image: semitechnologies/weaviate:1.17.2
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env:
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AUTHENTICATION_ANONYMOUS_ACCESS_ENABLED: "true"
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PERSISTENCE_DATA_PATH: "/var/lib/weaviate"
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ENABLE_EXPERIMENTAL_BM25: "true"
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DISK_USE_READONLY_PERCENTAGE: 95
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ports:
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- 8080:8080
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steps:
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- uses: actions/checkout@v3
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- name: Setup Python
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uses: ./.github/actions/python_cache/
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- name: Install Haystack
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run: pip install -U .[docstores]
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- name: Run tests
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run: |
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pytest --maxfail=5 -m "document_store and integration" test/document_stores/test_weaviate.py
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- uses: act10ns/slack@v2
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with:
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status: ${{ job.status }}
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channel: '#haystack'
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if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
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integration-tests-pinecone:
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name: Integration / pinecone / ${{ matrix.os }}
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needs:
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- unit-tests
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strategy:
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fail-fast: false
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matrix:
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os: [ubuntu-latest,macos-latest,windows-latest]
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runs-on: ${{ matrix.os }}
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steps:
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- uses: actions/checkout@v3
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- name: Setup Python
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uses: ./.github/actions/python_cache/
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- name: Install Haystack
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run: pip install .[pinecone]
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- name: Run tests
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env:
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PINECONE_API_KEY: ${{ secrets.PINECONE_API_KEY }}
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run: |
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pytest --maxfail=5 -m "document_store and integration" test/document_stores/test_pinecone.py
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- uses: act10ns/slack@v2
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with:
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status: ${{ job.status }}
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channel: '#haystack'
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if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
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integration-tests-milvus:
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name: Integration / Milvus / ${{ matrix.os }}
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needs:
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- unit-tests
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strategy:
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fail-fast: false
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matrix:
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os: [ubuntu-latest]
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runs-on: ${{ matrix.os }}
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steps:
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- uses: actions/checkout@v3
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- name: Setup Python
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uses: ./.github/actions/python_cache/
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- name: Setup Milvus
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run: |
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cd ../../ # Avoid causing permission issues on hashFiles later by creating unreadable folders like "volumes"
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wget https://github.com/milvus-io/milvus/releases/download/v2.0.0/milvus-standalone-docker-compose.yml -O docker-compose.yml
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sudo docker-compose up -d
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sudo docker-compose ps
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- name: Install Haystack
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run: pip install .[milvus]
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- name: Run tests
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run: |
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pytest --maxfail=5 -m "document_store and integration" test/document_stores/test_milvus.py
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- uses: act10ns/slack@v2
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with:
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status: ${{ job.status }}
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channel: '#haystack'
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if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
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integration-tests-memory:
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name: Integration / memory / ${{ matrix.os }}
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needs:
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- unit-tests
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strategy:
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fail-fast: false
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matrix:
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os: [ubuntu-latest,macos-latest,windows-latest]
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runs-on: ${{ matrix.os }}
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steps:
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- uses: actions/checkout@v3
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- name: Setup Python
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uses: ./.github/actions/python_cache/
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- name: Install Haystack
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run: pip install -U .
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- name: Run tests
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run: |
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pytest --maxfail=5 -m "document_store and integration" test/document_stores/test_memory.py
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- uses: act10ns/slack@v2
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with:
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status: ${{ job.status }}
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channel: '#haystack'
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if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
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integration-tests-agents:
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name: Integration / Agents / ${{ matrix.os }}
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needs:
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- unit-tests
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strategy:
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fail-fast: false
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matrix:
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os: [ubuntu-latest,windows-latest]
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runs-on: ${{ matrix.os }}
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steps:
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- uses: actions/checkout@v3
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- name: Setup Python
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uses: ./.github/actions/python_cache/
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- name: Install Haystack
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run: pip install -U .
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- name: Run tests
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run: |
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pytest --maxfail=5 -m "integration" test/agents
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- uses: act10ns/slack@v2
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with:
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status: ${{ job.status }}
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channel: '#haystack'
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if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
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#
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# IMPORTANT: the following steps need to be revisited PLEASE DO NOT ADD ANYTHING TO THE JOBS BELOW!
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#
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unit-tests-linux:
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needs: black
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strategy:
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fail-fast: false # Avoid cancelling the others if one of these fails
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matrix:
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folder:
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- "nodes"
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- "pipelines"
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- "modeling"
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- "others"
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runs-on: ubuntu-latest
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timeout-minutes: 30
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steps:
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- uses: actions/checkout@v3
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- name: Setup Python
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uses: ./.github/actions/python_cache/
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# TODO Let's try to remove this one from the unit tests
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- name: Install pdftotext
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run: wget --no-check-certificate https://dl.xpdfreader.com/xpdf-tools-linux-4.04.tar.gz && tar -xvf xpdf-tools-linux-4.04.tar.gz && sudo cp xpdf-tools-linux-4.04/bin64/pdftotext /usr/local/bin
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# TODO evaluate if tests that need these libraries are really unit tests
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- name: Install audio libraries
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run: |
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sudo apt-get update
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sudo apt-get install libsndfile1 ffmpeg
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|
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- name: Install Haystack
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run: pip install .[audio]
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|
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- name: Run tests
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env:
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TOKENIZERS_PARALLELISM: 'false'
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# as confusing as it seems, we skip tests marked as unit here as it means they have been migrated to the right job already
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run: |
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pytest ${{ env.PYTEST_PARAMS }} -m "not elasticsearch and not faiss and not milvus and not weaviate and not pinecone and not integration and not unit" test/${{ matrix.folder }} --document_store_type=memory
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|
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- uses: act10ns/slack@v2
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with:
|
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status: ${{ job.status }}
|
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channel: '#haystack'
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if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
|
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|
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unit-tests-windows:
|
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needs: black
|
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strategy:
|
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fail-fast: false # Avoid cancelling the others if one of these fails
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matrix:
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folder:
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- "nodes"
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- "pipelines"
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- "modeling"
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|
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runs-on: windows-latest
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if: contains(github.event.pull_request.labels.*.name, 'topic:windows') || !github.event.pull_request.draft
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timeout-minutes: 30
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|
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steps:
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- uses: actions/checkout@v3
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|
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- name: Setup Python
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uses: ./.github/actions/python_cache/
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with:
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prefix: windows
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|
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- name: Install pdftotext
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run: |
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choco install xpdf-utils
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choco install openjdk11
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refreshenv
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# - name: Install sndfile (audio support) # https://github.com/libsndfile/libsndfile/releases/download/1.1.0/libsndfile-1.1.0-win64.zip
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|
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- name: Install Haystack
|
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run: pip install .
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|
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- name: Run tests
|
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env:
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TOKENIZERS_PARALLELISM: 'false'
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# as confusing as it seems, we skip tests marked as unit here as it means they have been migrated to the right job already
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run: |
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pytest ${{ env.PYTEST_PARAMS }} -m "not elasticsearch and not faiss and not milvus and not weaviate and not pinecone and not integration and not unit" ${{ env.SUITES_EXCLUDED_FROM_WINDOWS }} test/${{ matrix.folder }} --document_store_type=memory
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|
|
- uses: act10ns/slack@v2
|
|
with:
|
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status: ${{ job.status }}
|
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channel: '#haystack'
|
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if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
|
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|
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integration-tests-linux:
|
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needs:
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- unit-tests-linux
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|
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timeout-minutes: 60
|
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strategy:
|
|
fail-fast: false # Avoid cancelling the others if one of these fails
|
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matrix:
|
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folder:
|
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- "nodes"
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- "pipelines"
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- "modeling"
|
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- "others"
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|
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runs-on: ubuntu-latest
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|
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steps:
|
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- uses: actions/checkout@v3
|
|
|
|
- name: Setup Python
|
|
uses: ./.github/actions/python_cache/
|
|
|
|
- name: Cache HF models
|
|
id: cache-hf-models
|
|
uses: actions/cache@v3
|
|
with:
|
|
path: ~/.cache/huggingface/transformers/
|
|
key: hf-models
|
|
env:
|
|
SEGMENT_DOWNLOAD_TIMEOUT_MINS: 15
|
|
|
|
- name: Download models
|
|
if: steps.cache-hf-models.outputs.cache-hit != 'true'
|
|
run: |
|
|
python -c "from transformers import AutoModel;[AutoModel.from_pretrained(model_name) for model_name in ['vblagoje/bart_lfqa','yjernite/bart_eli5', 'vblagoje/dpr-ctx_encoder-single-lfqa-wiki', 'vblagoje/dpr-question_encoder-single-lfqa-wiki', 'facebook/dpr-question_encoder-single-nq-base', 'facebook/dpr-ctx_encoder-single-nq-base', 'elastic/distilbert-base-cased-finetuned-conll03-english', 'deepset/bert-medium-squad2-distilled']]"
|
|
|
|
- name: Run Elasticsearch
|
|
run: |
|
|
docker run -d -p 9200:9200 -e "discovery.type=single-node" -e "ES_JAVA_OPTS=-Xms128m -Xmx256m" elasticsearch:7.9.2
|
|
|
|
- name: Run Opensearch
|
|
run: |
|
|
docker run -d -p 9201:9200 -p 9600:9600 -e "discovery.type=single-node" opensearchproject/opensearch:1.3.5
|
|
|
|
- name: Run Milvus
|
|
run: |
|
|
cd ../../ # Avoid causing permission issues on hashFiles later by creating unreadable folders like "volumes"
|
|
wget https://github.com/milvus-io/milvus/releases/download/v2.0.0/milvus-standalone-docker-compose.yml -O docker-compose.yml
|
|
sudo docker-compose up -d
|
|
sudo docker-compose ps
|
|
|
|
- name: Run Weaviate
|
|
run: docker run -d -p 8080:8080 --name haystack_test_weaviate --env AUTHENTICATION_ANONYMOUS_ACCESS_ENABLED='true' --env PERSISTENCE_DATA_PATH='/var/lib/weaviate' --env ENABLE_EXPERIMENTAL_BM25='true' --env DISK_USE_READONLY_PERCENTAGE='95' semitechnologies/weaviate:1.17.2
|
|
|
|
- name: Run Apache Tika
|
|
run: docker run -d -p 9998:9998 -e "TIKA_CHILD_JAVA_OPTS=-JXms128m" -e "TIKA_CHILD_JAVA_OPTS=-JXmx128m" apache/tika:1.28.4
|
|
|
|
- name: Run Parsr
|
|
run: docker run -d -p 3001:3001 axarev/parsr:v1.2.2
|
|
|
|
- name: Install pdftotext
|
|
run: wget --no-check-certificate https://dl.xpdfreader.com/xpdf-tools-linux-4.04.tar.gz && tar -xvf xpdf-tools-linux-4.04.tar.gz && sudo cp xpdf-tools-linux-4.04/bin64/pdftotext /usr/local/bin
|
|
|
|
- name: Install tesseract
|
|
run: |
|
|
sudo apt update
|
|
sudo apt-get install tesseract-ocr libtesseract-dev poppler-utils
|
|
|
|
- name: Install audio libraries
|
|
run: |
|
|
sudo apt-get update
|
|
sudo apt-get install libsndfile1 ffmpeg
|
|
|
|
- name: Install Haystack
|
|
run: pip install .
|
|
|
|
- name: Run tests
|
|
env:
|
|
TOKENIZERS_PARALLELISM: 'false' # Avoid logspam by tokenizers
|
|
# we add "and not document_store" to exclude the tests that were ported to the new strategy
|
|
run: |
|
|
pytest ${{ env.PYTEST_PARAMS }} -m "integration and not document_store" test/${{ matrix.folder }}
|
|
|
|
- name: Dump docker logs on failure
|
|
if: failure()
|
|
uses: jwalton/gh-docker-logs@v1
|
|
|
|
- uses: act10ns/slack@v2
|
|
with:
|
|
status: ${{ job.status }}
|
|
channel: '#haystack'
|
|
if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
|
|
|
|
integration-tests-windows:
|
|
needs:
|
|
- unit-tests-windows
|
|
runs-on: windows-latest
|
|
if: contains(github.event.pull_request.labels.*.name, 'topic:windows') || !github.event.pull_request.draft
|
|
|
|
timeout-minutes: 30
|
|
strategy:
|
|
fail-fast: false # Avoid cancelling the others if one of these fails
|
|
matrix:
|
|
folder:
|
|
- "nodes"
|
|
- "pipelines"
|
|
- "modeling"
|
|
- "others"
|
|
|
|
steps:
|
|
- uses: actions/checkout@v3
|
|
|
|
- name: Install dependencies
|
|
run: |
|
|
choco install --no-progress xpdf-utils
|
|
choco install --no-progress tesseract
|
|
choco install --no-progress openjdk --version=11.0.2.01
|
|
refreshenv
|
|
choco install --no-progress elasticsearch --version=7.9.2
|
|
refreshenv
|
|
Get-Service elasticsearch-service-x64 | Start-Service
|
|
|
|
- name: Setup Python
|
|
uses: ./.github/actions/python_cache/
|
|
with:
|
|
prefix: windows
|
|
|
|
- name: Install Haystack
|
|
run: pip install .
|
|
|
|
- name: Run tests
|
|
env:
|
|
TOKENIZERS_PARALLELISM: 'false' # Avoid logspam by tokenizers
|
|
# FIXME many tests are disabled here!
|
|
run: |
|
|
pytest ${{ env.PYTEST_PARAMS }} -m "integration and not tika and not graphdb" ${{ env.SUITES_EXCLUDED_FROM_WINDOWS }} test/${{ matrix.folder }} --document_store_type=memory,faiss,elasticsearch
|
|
|
|
- uses: act10ns/slack@v2
|
|
with:
|
|
status: ${{ job.status }}
|
|
channel: '#haystack'
|
|
if: failure() && github.repository_owner == 'deepset-ai' && github.ref == 'refs/heads/main'
|
|
|
|
catch-all:
|
|
name: Catch-all check
|
|
runs-on: ubuntu-latest
|
|
# This job will be executed only after all the other tests
|
|
# are successful.
|
|
# This way we'll be able to mark only this test as required
|
|
# and skip it accordingly.
|
|
needs:
|
|
- integration-tests-elasticsearch
|
|
- integration-tests-sql
|
|
- integration-tests-opensearch
|
|
- integration-tests-dc
|
|
- integration-tests-faiss
|
|
- integration-tests-weaviate
|
|
- integration-tests-pinecone
|
|
- integration-tests-milvus
|
|
- integration-tests-memory
|
|
- integration-tests-linux
|
|
- integration-tests-windows
|
|
|
|
steps:
|
|
- name: Finisher
|
|
run: echo "Finish him!"
|