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https://github.com/allenai/olmocr.git
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Adding marker benchmark
This commit is contained in:
Jake Poznanski
parent
9787d007b9
commit
044874a634
197
scripts/run_marker_benchmark.sh
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197
scripts/run_marker_benchmark.sh
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#!/bin/bash
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# Runs marker benchmark, measuring both olmOCR-bench performance and per document processing performance
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# ./scripts/run_marker_benchmark.sh
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# ./scripts/run_marker_benchmark.sh 1.7.5
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set -e
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# Parse command line arguments
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MARKER_VERSION="${1:-1.7.5}"
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echo "Using marker version: $MARKER_VERSION"
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# Check for uncommitted changes
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if ! git diff-index --quiet HEAD --; then
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echo "Error: There are uncommitted changes in the repository."
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echo "Please commit or stash your changes before running the benchmark."
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echo ""
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echo "Uncommitted changes:"
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git status --short
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exit 1
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fi
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# Use conda environment Python if available, otherwise use system Python
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if [ -n "$CONDA_PREFIX" ]; then
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PYTHON="$CONDA_PREFIX/bin/python"
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echo "Using conda Python from: $CONDA_PREFIX"
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else
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PYTHON="python"
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echo "Warning: No conda environment detected, using system Python"
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fi
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# Get version from version.py
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VERSION=$($PYTHON -c 'import olmocr.version; print(olmocr.version.VERSION)')
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echo "OlmOCR version: $VERSION"
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# Get first 10 characters of git hash
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GIT_HASH=$(git rev-parse HEAD | cut -c1-10)
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echo "Git hash: $GIT_HASH"
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# Get current git branch name
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GIT_BRANCH=$(git rev-parse --abbrev-ref HEAD)
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echo "Git branch: $GIT_BRANCH"
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# Create full image tag
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IMAGE_TAG="olmocr-benchmark-${VERSION}-${GIT_HASH}"
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echo "Building Docker image with tag: $IMAGE_TAG"
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# Build the Docker image
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echo "Building Docker image..."
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docker build --platform linux/amd64 -f ./Dockerfile -t $IMAGE_TAG .
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# Get Beaker username
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BEAKER_USER=$(beaker account whoami --format json | jq -r '.[0].name')
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echo "Beaker user: $BEAKER_USER"
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# Push image to beaker
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echo "Trying to push image to Beaker..."
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if ! beaker image create --workspace ai2/oe-data-pdf --name $IMAGE_TAG $IMAGE_TAG 2>/dev/null; then
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echo "Warning: Beaker image with tag $IMAGE_TAG already exists. Using existing image."
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fi
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# Create Python script to run beaker experiment
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cat << 'EOF' > /tmp/run_benchmark_experiment.py
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import sys
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from beaker import Beaker, ExperimentSpec, TaskSpec, TaskContext, ResultSpec, TaskResources, ImageSource, Priority, Constraints, EnvVar
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# Get image tag, beaker user, git branch, git hash, and marker version from command line
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image_tag = sys.argv[1]
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beaker_user = sys.argv[2]
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git_branch = sys.argv[3]
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git_hash = sys.argv[4]
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marker_version = sys.argv[5]
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# Initialize Beaker client
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b = Beaker.from_env(default_workspace="ai2/olmocr")
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# Check if AWS credentials secret exists
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aws_creds_secret = f"{beaker_user}-AWS_CREDENTIALS_FILE"
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try:
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# Try to get the secret to see if it exists
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b.secret.get(aws_creds_secret, workspace="ai2/olmocr")
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has_aws_creds = True
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print(f"Found AWS credentials secret: {aws_creds_secret}")
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except:
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has_aws_creds = False
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print(f"AWS credentials secret not found: {aws_creds_secret}")
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# First experiment: Original benchmark job
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commands = []
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if has_aws_creds:
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commands.extend([
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"mkdir -p ~/.aws",
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'echo "$AWS_CREDENTIALS_FILE" > ~/.aws/credentials'
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])
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commands.extend([
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"git clone https://huggingface.co/datasets/allenai/olmOCR-bench",
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"cd olmOCR-bench && git lfs pull && cd ..",
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f"pip install marker=={marker_version}",
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"python -m olmocr.bench.convert marker --dir ./olmOCR-bench/bench_data",
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"python -m olmocr.bench.benchmark --dir ./olmOCR-bench/bench_data"
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])
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# Build task spec with optional env vars
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task_spec_args = {
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"name": "marker-benchmark",
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"image": ImageSource(beaker=f"{beaker_user}/{image_tag}"),
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"command": [
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"bash", "-c",
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" && ".join(commands)
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],
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"context": TaskContext(
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priority=Priority.normal,
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preemptible=True,
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),
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"resources": TaskResources(gpu_count=1),
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"constraints": Constraints(cluster=["ai2/ceres-cirrascale", "ai2/jupiter-cirrascale-2"]),
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"result": ResultSpec(path="/noop-results"),
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}
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# Add env vars if AWS credentials exist
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if has_aws_creds:
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task_spec_args["env_vars"] = [
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EnvVar(name="AWS_CREDENTIALS_FILE", secret=aws_creds_secret)
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]
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# Create first experiment spec
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experiment_spec = ExperimentSpec(
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description=f"Marker {marker_version} Benchmark Run - Branch: {git_branch}, Commit: {git_hash}",
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budget="ai2/oe-data",
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tasks=[TaskSpec(**task_spec_args)],
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)
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# Create the first experiment
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experiment = b.experiment.create(spec=experiment_spec, workspace="ai2/olmocr")
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print(f"Created benchmark experiment: {experiment.id}")
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print(f"View at: https://beaker.org/ex/{experiment.id}")
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print("-------")
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print("")
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perf_commands = []
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if has_aws_creds:
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perf_commands.extend([
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"mkdir -p ~/.aws",
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'echo "$AWS_CREDENTIALS_FILE" > ~/.aws/credentials'
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])
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perf_commands.extend([
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f"pip install marker=={marker_version}",
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"s5cmd cp s3://ai2-oe-data/jakep/olmocr/olmOCR-mix-0225/benchmark_set/* /root/olmOCR-mix-0225_benchmark_set/",
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"marker --force_ocr /root/olmOCR-mix-0225_benchmark_set/ --output_dir /root/olmOCR-mix-0225_benchmark_set_marker --workers 8"
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])
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# Build performance task spec
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perf_task_spec_args = {
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"name": "marker-performance",
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"image": ImageSource(beaker=f"{beaker_user}/{image_tag}"),
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"command": [
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"bash", "-c",
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" && ".join(perf_commands)
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],
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"context": TaskContext(
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priority=Priority.normal,
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preemptible=True,
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),
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"resources": TaskResources(gpu_count=1),
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"constraints": Constraints(cluster=["ai2/ceres-cirrascale", "ai2/jupiter-cirrascale-2"]),
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"result": ResultSpec(path="/noop-results"),
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}
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# Add env vars if AWS credentials exist
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if has_aws_creds:
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perf_task_spec_args["env_vars"] = [
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EnvVar(name="AWS_CREDENTIALS_FILE", secret=aws_creds_secret)
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]
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# Create performance experiment spec
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perf_experiment_spec = ExperimentSpec(
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description=f"Marker {marker_version} Performance Test - Branch: {git_branch}, Commit: {git_hash}",
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budget="ai2/oe-data",
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tasks=[TaskSpec(**perf_task_spec_args)],
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)
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# Create the performance experiment
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perf_experiment = b.experiment.create(spec=perf_experiment_spec, workspace="ai2/olmocr")
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print(f"Created performance experiment: {perf_experiment.id}")
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print(f"View at: https://beaker.org/ex/{perf_experiment.id}")
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EOF
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# Run the Python script to create the experiments
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echo "Creating Beaker experiments..."
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$PYTHON /tmp/run_benchmark_experiment.py $IMAGE_TAG $BEAKER_USER $GIT_BRANCH $GIT_HASH $MARKER_VERSION
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# Clean up temporary file
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rm /tmp/run_benchmark_experiment.py
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echo "Benchmark experiments submitted successfully!"
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