mirror of
https://github.com/allenai/olmocr.git
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218 lines
8.3 KiB
Python
218 lines
8.3 KiB
Python
import os
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import glob
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import random
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import argparse
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import boto3
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import base64
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from pypdf import PdfReader, PdfWriter
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from tqdm import tqdm
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from concurrent.futures import ProcessPoolExecutor, as_completed
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from urllib.parse import urlparse
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from typing import List
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from pdelfin.data.renderpdf import render_pdf_to_base64png
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from pdelfin.filter import PdfFilter
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pdf_filter = PdfFilter()
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def sample_pdf_pages(num_pages: int, first_n_pages: int, max_sample_pages: int) -> List[int]:
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"""
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Returns a list of sampled page indices (1-based).
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- Always include the first_n_pages (or all pages if num_pages < first_n_pages).
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- Randomly sample the remaining pages up to a total of max_sample_pages.
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"""
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if num_pages <= first_n_pages:
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return list(range(1, num_pages + 1))
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sample_pages = list(range(1, first_n_pages + 1))
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remaining_pages = list(range(first_n_pages + 1, num_pages + 1))
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if remaining_pages:
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# How many random pages to pick beyond the first_n_pages
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random_pick = min(max_sample_pages - first_n_pages, len(remaining_pages))
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sample_pages += random.sample(remaining_pages, random_pick)
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return sample_pages
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def fetch_s3_file(s3_url: str, local_path: str) -> str:
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"""
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Download a file from an S3 URI (s3://bucket/key) to local_path.
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"""
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parsed = urlparse(s3_url)
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bucket_name = parsed.netloc
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key = parsed.path.lstrip('/')
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s3 = boto3.client('s3')
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s3.download_file(bucket_name, key, local_path)
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return local_path
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def extract_single_page_pdf(input_pdf_path: str, page_number: int, output_pdf_path: str) -> None:
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"""
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Extracts exactly one page (page_number, 1-based) from input_pdf_path
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and writes to output_pdf_path.
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"""
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reader = PdfReader(input_pdf_path)
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writer = PdfWriter()
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# Page numbers in PdfReader are 0-based
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writer.add_page(reader.pages[page_number - 1])
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with open(output_pdf_path, "wb") as f:
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writer.write(f)
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def process_pdf(
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pdf_path: str,
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first_n_pages: int,
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max_sample_pages: int,
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no_filter: bool,
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output_dir: str
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):
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"""
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- Download the PDF locally if it's in S3.
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- Optionally filter the PDF (if no_filter=False).
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- Sample the pages.
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- For each sampled page, extract a one-page PDF and also render it to PNG.
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"""
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if pdf_path.startswith("s3://"):
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local_pdf_path = os.path.join("/tmp", os.path.basename(pdf_path))
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fetch_s3_file(pdf_path, local_pdf_path)
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else:
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local_pdf_path = pdf_path
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if (not no_filter) and pdf_filter.filter_out_pdf(local_pdf_path):
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print(f"Skipping {local_pdf_path} due to filter.")
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return False
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# Make sure we have an absolute path for the PDF name
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base_pdf_name = os.path.splitext(os.path.basename(pdf_path))[0]
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reader = PdfReader(local_pdf_path)
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num_pages = len(reader.pages)
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sampled_pages = sample_pdf_pages(num_pages, first_n_pages, max_sample_pages)
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# For each sampled page, produce a single-page PDF and a PNG
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for page_num in sampled_pages:
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single_pdf_name = f"{base_pdf_name}_page{page_num}.pdf"
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single_png_name = f"{base_pdf_name}_page{page_num}.png"
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single_pdf_path = os.path.join(output_dir, single_pdf_name)
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single_png_path = os.path.join(output_dir, single_png_name)
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try:
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# 1) Extract single-page PDF
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extract_single_page_pdf(local_pdf_path, page_num, single_pdf_path)
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# 2) Render that single-page PDF to a PNG
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b64png = render_pdf_to_base64png(single_pdf_path, page_num=0, target_longest_image_dim=1024)
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with open(single_png_path, "wb") as pngf:
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pngf.write(base64.b64decode(b64png))
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except Exception as e:
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print(f"Error while processing {pdf_path}, page {page_num}: {e}")
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return True
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def main():
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parser = argparse.ArgumentParser(description="Sample PDFs, extract single-page PDFs, and render them as PNG.")
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parser.add_argument("--glob_path", type=str, help="Local or S3 path glob (e.g., *.pdf or s3://bucket/pdfs/*.pdf).")
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parser.add_argument("--path_list", type=str, help="Path to a file containing paths to PDFs, one per line.")
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parser.add_argument("--no_filter", action="store_true", help="Disables filtering so that ALL PDFs are processed.")
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parser.add_argument("--num_sample_docs", type=int, default=2000, help="Number of PDF documents to sample.")
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parser.add_argument("--first_n_pages", type=int, default=0, help="Always sample the first N pages of each PDF.")
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parser.add_argument("--max_sample_pages", type=int, default=1, help="Max number of pages to sample per PDF.")
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parser.add_argument("--output_dir", type=str, default="sampled_pages_output", help="Output directory for the extracted PDFs and PNGs.")
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parser.add_argument("--reservoir_size", type=int, default=None,
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help="Size of the reservoir for sampling paths. Defaults to 10x num_sample_docs.")
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args = parser.parse_args()
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# Set default reservoir_size if not provided
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if args.reservoir_size is None:
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args.reservoir_size = 10 * args.num_sample_docs
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os.makedirs(args.output_dir, exist_ok=True)
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# Reservoir sample for PDF paths
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pdf_paths = []
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n = 0 # total number of items seen
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# Either load from glob or from path_list
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if args.glob_path:
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if args.glob_path.startswith("s3://"):
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# Handle S3 globbing
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parsed = urlparse(args.glob_path)
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s3 = boto3.client('s3')
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bucket_name = parsed.netloc
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prefix = os.path.dirname(parsed.path.lstrip('/')) + "/"
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paginator = s3.get_paginator('list_objects_v2')
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page_iterator = paginator.paginate(Bucket=bucket_name, Prefix=prefix)
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for page in page_iterator:
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for obj in page.get('Contents', []):
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if obj['Key'].endswith('.pdf'):
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n += 1
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path = f"s3://{bucket_name}/{obj['Key']}"
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if len(pdf_paths) < args.reservoir_size:
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pdf_paths.append(path)
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else:
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s = random.randint(1, n)
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if s <= args.reservoir_size:
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pdf_paths[s - 1] = path
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else:
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# Handle local globbing
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for path in glob.iglob(args.glob_path, recursive=True):
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n += 1
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if len(pdf_paths) < args.reservoir_size:
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pdf_paths.append(path)
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else:
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s = random.randint(1, n)
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if s <= args.reservoir_size:
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pdf_paths[s - 1] = path
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elif args.path_list:
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with open(args.path_list, 'r') as f:
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for line in f:
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path = line.strip()
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if not path:
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continue
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n += 1
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if len(pdf_paths) < args.reservoir_size:
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pdf_paths.append(path)
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else:
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s = random.randint(1, n)
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if s <= args.reservoir_size:
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pdf_paths[s - 1] = path
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# Shuffle the reservoir so we don't always pick from the front
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random.shuffle(pdf_paths)
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print(f"Loaded and shuffled {len(pdf_paths)} PDF paths. Will process up to {args.num_sample_docs} of them.")
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pdfs_with_output = 0
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# Use a ProcessPoolExecutor to parallelize PDF processing
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# You may reduce max_workers if you have memory/CPU constraints
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with ProcessPoolExecutor() as executor:
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futures = {}
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# Submit tasks
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for pdf_path in pdf_paths:
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future = executor.submit(
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process_pdf,
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pdf_path,
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args.first_n_pages,
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args.max_sample_pages,
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args.no_filter,
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args.output_dir
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)
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futures[future] = pdf_path
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# Track completion
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for future in tqdm(as_completed(futures), total=len(futures), desc="Processing PDFs"):
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if future.result():
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pdfs_with_output += 1
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if pdfs_with_output >= args.num_sample_docs:
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# Cancel remaining tasks
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executor.shutdown(cancel_futures=True)
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break
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print(f"Done. Processed or attempted to process {pdfs_with_output} PDFs. Output is in: {args.output_dir}")
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if __name__ == "__main__":
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main()
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