2024-06-01 16:24:10 +08:00
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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#
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2025-03-05 11:55:27 +08:00
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import logging
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Fix "File contains no valid workbook part" (#9360)
### What problem does this PR solve?
fix "File contains no valid workbook part"
stacktrace:
```
Traceback (most recent call last):
File "/ragflow/deepdoc/parser/excel_parser.py", line 54, in _load_excel_to_workbook
return RAGFlowExcelParser._dataframe_to_workbook(df)
File "/ragflow/deepdoc/parser/excel_parser.py", line 69, in _dataframe_to_workbook
ws.cell(row=row_num, column=col_num, value=value)
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/worksheet/worksheet.py", line 246, in cell
cell.value = value
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 218, in value
self._bind_value(value)
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 197, in _bind_value
value = self.check_string(value)
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 165, in check_string
raise IllegalCharacterError(f"{value} cannot be used in worksheets.")
```
### Type of change
- [x] Bug Fix (non-breaking change which fixes an issue)
- [ ] New Feature (non-breaking change which adds functionality)
- [ ] Documentation Update
- [ ] Refactoring
- [ ] Performance Improvement
- [ ] Other (please describe):
2025-08-12 14:58:36 +08:00
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import re
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2024-01-15 08:46:22 +08:00
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import sys
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from io import BytesIO
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2025-02-12 12:39:25 +08:00
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import pandas as pd
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2025-03-12 19:20:50 +08:00
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from openpyxl import Workbook, load_workbook
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from rag.nlp import find_codec
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2025-02-12 12:39:25 +08:00
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Fix "File contains no valid workbook part" (#9360)
### What problem does this PR solve?
fix "File contains no valid workbook part"
stacktrace:
```
Traceback (most recent call last):
File "/ragflow/deepdoc/parser/excel_parser.py", line 54, in _load_excel_to_workbook
return RAGFlowExcelParser._dataframe_to_workbook(df)
File "/ragflow/deepdoc/parser/excel_parser.py", line 69, in _dataframe_to_workbook
ws.cell(row=row_num, column=col_num, value=value)
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/worksheet/worksheet.py", line 246, in cell
cell.value = value
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 218, in value
self._bind_value(value)
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 197, in _bind_value
value = self.check_string(value)
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 165, in check_string
raise IllegalCharacterError(f"{value} cannot be used in worksheets.")
```
### Type of change
- [x] Bug Fix (non-breaking change which fixes an issue)
- [ ] New Feature (non-breaking change which adds functionality)
- [ ] Documentation Update
- [ ] Refactoring
- [ ] Performance Improvement
- [ ] Other (please describe):
2025-08-12 14:58:36 +08:00
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# copied from `/openpyxl/cell/cell.py`
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ILLEGAL_CHARACTERS_RE = re.compile(r'[\000-\010]|[\013-\014]|[\016-\037]')
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2024-01-15 08:46:22 +08:00
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2024-04-28 13:19:54 +08:00
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class RAGFlowExcelParser:
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2025-03-12 19:20:50 +08:00
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2025-03-05 11:55:27 +08:00
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@staticmethod
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def _load_excel_to_workbook(file_like_object):
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2025-03-12 19:20:50 +08:00
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if isinstance(file_like_object, bytes):
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file_like_object = BytesIO(file_like_object)
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# Read first 4 bytes to determine file type
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file_like_object.seek(0)
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file_head = file_like_object.read(4)
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file_like_object.seek(0)
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if not (file_head.startswith(b'PK\x03\x04') or file_head.startswith(b'\xD0\xCF\x11\xE0')):
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2025-07-25 12:04:07 +08:00
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logging.info("Not an Excel file, converting CSV to Excel Workbook")
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2025-03-12 19:20:50 +08:00
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try:
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file_like_object.seek(0)
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df = pd.read_csv(file_like_object)
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return RAGFlowExcelParser._dataframe_to_workbook(df)
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except Exception as e_csv:
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raise Exception(f"Failed to parse CSV and convert to Excel Workbook: {e_csv}")
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2025-03-12 19:20:50 +08:00
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2025-02-12 12:39:25 +08:00
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try:
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2025-03-28 09:33:49 +08:00
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return load_workbook(file_like_object,data_only= True)
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2025-02-12 12:39:25 +08:00
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except Exception as e:
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2025-07-25 12:04:07 +08:00
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logging.info(f"openpyxl load error: {e}, try pandas instead")
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2025-03-05 11:55:27 +08:00
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try:
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2025-03-12 19:20:50 +08:00
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file_like_object.seek(0)
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Add fallback to use 'calamine' parse engine in excel_parser.py (#9374)
### What problem does this PR solve?
add fallback to `calamine` engine when parse error raised using the
default `openpyxl` / `xlrd` engine.
e.g. the following error can be fixed:
```
Traceback (most recent call last):
File "/ragflow/deepdoc/parser/excel_parser.py", line 53, in _load_excel_to_workbook
df = pd.read_excel(file_like_object)
File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 495, in read_excel
io = ExcelFile(
File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 1567, in __init__
self._reader = self._engines[engine](
File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_xlrd.py", line 46, in __init__
super().__init__(
File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 573, in __init__
self.book = self.load_workbook(self.handles.handle, engine_kwargs)
File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_xlrd.py", line 63, in load_workbook
return open_workbook(file_contents=data, **engine_kwargs)
File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/__init__.py", line 172, in open_workbook
bk = open_workbook_xls(
File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/book.py", line 68, in open_workbook_xls
bk.biff2_8_load(
File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/book.py", line 641, in biff2_8_load
cd.locate_named_stream(UNICODE_LITERAL(qname))
File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/compdoc.py", line 398, in locate_named_stream
result = self._locate_stream(
File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/compdoc.py", line 429, in _locate_stream
raise CompDocError("%s corruption: seen[%d] == %d" % (qname, s, self.seen[s]))
xlrd.compdoc.CompDocError: Workbook corruption: seen[2] == 4
```
### Type of change
- [x] Bug Fix (non-breaking change which fixes an issue)
2025-08-12 12:41:33 +08:00
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try:
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df = pd.read_excel(file_like_object)
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return RAGFlowExcelParser._dataframe_to_workbook(df)
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except Exception as ex:
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logging.info(f"pandas with default engine load error: {ex}, try calamine instead")
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file_like_object.seek(0)
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df = pd.read_excel(file_like_object, engine='calamine')
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return RAGFlowExcelParser._dataframe_to_workbook(df)
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2025-03-05 11:55:27 +08:00
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except Exception as e_pandas:
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2025-07-25 12:04:07 +08:00
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raise Exception(f"pandas.read_excel error: {e_pandas}, original openpyxl error: {e}")
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2025-03-12 19:20:50 +08:00
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Fix "File contains no valid workbook part" (#9360)
### What problem does this PR solve?
fix "File contains no valid workbook part"
stacktrace:
```
Traceback (most recent call last):
File "/ragflow/deepdoc/parser/excel_parser.py", line 54, in _load_excel_to_workbook
return RAGFlowExcelParser._dataframe_to_workbook(df)
File "/ragflow/deepdoc/parser/excel_parser.py", line 69, in _dataframe_to_workbook
ws.cell(row=row_num, column=col_num, value=value)
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/worksheet/worksheet.py", line 246, in cell
cell.value = value
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 218, in value
self._bind_value(value)
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 197, in _bind_value
value = self.check_string(value)
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 165, in check_string
raise IllegalCharacterError(f"{value} cannot be used in worksheets.")
```
### Type of change
- [x] Bug Fix (non-breaking change which fixes an issue)
- [ ] New Feature (non-breaking change which adds functionality)
- [ ] Documentation Update
- [ ] Refactoring
- [ ] Performance Improvement
- [ ] Other (please describe):
2025-08-12 14:58:36 +08:00
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@staticmethod
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def _clean_dataframe(df: pd.DataFrame):
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def clean_string(s):
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if isinstance(s, str):
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return ILLEGAL_CHARACTERS_RE.sub(" ", s)
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return s
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return df.apply(lambda col: col.map(clean_string))
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2025-03-12 19:20:50 +08:00
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@staticmethod
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def _dataframe_to_workbook(df):
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Fix "File contains no valid workbook part" (#9360)
### What problem does this PR solve?
fix "File contains no valid workbook part"
stacktrace:
```
Traceback (most recent call last):
File "/ragflow/deepdoc/parser/excel_parser.py", line 54, in _load_excel_to_workbook
return RAGFlowExcelParser._dataframe_to_workbook(df)
File "/ragflow/deepdoc/parser/excel_parser.py", line 69, in _dataframe_to_workbook
ws.cell(row=row_num, column=col_num, value=value)
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/worksheet/worksheet.py", line 246, in cell
cell.value = value
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 218, in value
self._bind_value(value)
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 197, in _bind_value
value = self.check_string(value)
File "/ragflow/.venv/lib/python3.10/site-packages/openpyxl/cell/cell.py", line 165, in check_string
raise IllegalCharacterError(f"{value} cannot be used in worksheets.")
```
### Type of change
- [x] Bug Fix (non-breaking change which fixes an issue)
- [ ] New Feature (non-breaking change which adds functionality)
- [ ] Documentation Update
- [ ] Refactoring
- [ ] Performance Improvement
- [ ] Other (please describe):
2025-08-12 14:58:36 +08:00
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df = RAGFlowExcelParser._clean_dataframe(df)
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2025-03-12 19:20:50 +08:00
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wb = Workbook()
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ws = wb.active
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ws.title = "Data"
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for col_num, column_name in enumerate(df.columns, 1):
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ws.cell(row=1, column=col_num, value=column_name)
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for row_num, row in enumerate(df.values, 2):
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for col_num, value in enumerate(row, 1):
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ws.cell(row=row_num, column=col_num, value=value)
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return wb
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2024-05-20 18:35:15 +08:00
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2025-03-05 11:55:27 +08:00
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def html(self, fnm, chunk_rows=256):
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2025-08-15 17:00:34 +08:00
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from html import escape
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2025-03-05 11:55:27 +08:00
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file_like_object = BytesIO(fnm) if not isinstance(fnm, str) else fnm
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wb = RAGFlowExcelParser._load_excel_to_workbook(file_like_object)
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2024-05-20 18:35:15 +08:00
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tb_chunks = []
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2025-08-15 17:00:34 +08:00
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def _fmt(v):
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if v is None:
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return ""
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return str(v).strip()
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2024-03-20 16:56:16 +08:00
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for sheetname in wb.sheetnames:
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ws = wb[sheetname]
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rows = list(ws.rows)
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2024-12-08 14:21:12 +08:00
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if not rows:
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continue
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2024-05-20 18:35:15 +08:00
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tb_rows_0 = "<tr>"
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2024-03-27 11:33:46 +08:00
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for t in list(rows[0]):
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tb_rows_0 += f"<th>{escape(_fmt(t.value))}</th>"
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2024-05-20 18:35:15 +08:00
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tb_rows_0 += "</tr>"
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for chunk_i in range((len(rows) - 1) // chunk_rows + 1):
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tb = ""
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tb += f"<table><caption>{sheetname}</caption>"
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tb += tb_rows_0
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for r in list(
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rows[1 + chunk_i * chunk_rows: min(1 + (chunk_i + 1) * chunk_rows, len(rows))]
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):
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tb += "<tr>"
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for i, c in enumerate(r):
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if c.value is None:
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tb += "<td></td>"
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else:
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tb += f"<td>{c.value}</td>"
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tb += "</tr>"
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tb += "</table>\n"
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tb_chunks.append(tb)
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return tb_chunks
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2024-03-20 16:56:16 +08:00
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2025-08-28 18:40:32 +08:00
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def markdown(self, fnm):
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import pandas as pd
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file_like_object = BytesIO(fnm) if not isinstance(fnm, str) else fnm
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df = pd.read_excel(file_like_object)
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return df.to_markdown(index=False)
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2024-01-15 08:46:22 +08:00
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def __call__(self, fnm):
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file_like_object = BytesIO(fnm) if not isinstance(fnm, str) else fnm
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wb = RAGFlowExcelParser._load_excel_to_workbook(file_like_object)
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2025-02-12 12:39:25 +08:00
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2024-01-15 08:46:22 +08:00
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res = []
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for sheetname in wb.sheetnames:
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ws = wb[sheetname]
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rows = list(ws.rows)
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if not rows:
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continue
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2024-01-15 08:46:22 +08:00
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ti = list(rows[0])
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for r in list(rows[1:]):
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2024-12-08 14:21:12 +08:00
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fields = []
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2024-03-27 11:33:46 +08:00
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for i, c in enumerate(r):
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if not c.value:
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continue
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2024-01-15 08:46:22 +08:00
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t = str(ti[i].value) if i < len(ti) else ""
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t += (":" if t else "") + str(c.value)
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fields.append(t)
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line = "; ".join(fields)
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if sheetname.lower().find("sheet") < 0:
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line += " ——" + sheetname
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res.append(line)
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2024-01-15 08:46:22 +08:00
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return res
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2024-03-12 11:57:08 +08:00
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@staticmethod
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def row_number(fnm, binary):
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if fnm.split(".")[-1].lower().find("xls") >= 0:
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2025-03-05 11:55:27 +08:00
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wb = RAGFlowExcelParser._load_excel_to_workbook(BytesIO(binary))
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2024-03-12 11:57:08 +08:00
|
|
|
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total = 0
|
|
|
|
|
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for sheetname in wb.sheetnames:
|
|
|
|
|
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ws = wb[sheetname]
|
2024-03-14 19:45:29 +08:00
|
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|
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total += len(list(ws.rows))
|
2024-12-19 17:30:26 +08:00
|
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return total
|
2024-03-12 11:57:08 +08:00
|
|
|
|
|
|
|
|
|
|
if fnm.split(".")[-1].lower() in ["csv", "txt"]:
|
2024-04-19 18:02:53 +08:00
|
|
|
|
encoding = find_codec(binary)
|
2024-05-07 12:25:47 +08:00
|
|
|
|
txt = binary.decode(encoding, errors="ignore")
|
2024-03-12 11:57:08 +08:00
|
|
|
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return len(txt.split("\n"))
|
|
|
|
|
|
|
2024-01-15 08:46:22 +08:00
|
|
|
|
|
|
|
|
|
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if __name__ == "__main__":
|
2024-04-28 13:19:54 +08:00
|
|
|
|
psr = RAGFlowExcelParser()
|
2024-01-15 08:46:22 +08:00
|
|
|
|
psr(sys.argv[1])
|