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unstructured/test_unstructured_ingest/test-ingest-pdf-fast-reprocess.sh

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Chore(ingest) : add tests on PDFs with fast strategy (#614) Summary * Updates "fast" PDF output element ordering to be consistent across Python versions by using the X,Y coordinates of elements extracted * Added PDFs ingest tests with fast strategy with new script ./test_unstructured_ingest/test-ingest-pdf-fast-reprocess.sh Updated ingest tests procedure: * Processing files with hi_res strategy, and preserve downloads to repo files-ingest-download/<ingest_test_name> * Reprocessing all PDFs with fast strategy from local file files-ingest-download, the partition outputs are stored at expected-structured-output/pdf-fast-reprocess/<ingest_test_name> Test * Reproduce tests with ./scripts/ingest-test-fixtures-update.sh , should expect no update. Also don't need any secret tokens since relevant tests won't produce PDFs.
2023-06-12 15:02:48 -04:00
#!/usr/bin/env bash
# A local connector to process pre-downloaded PDFs under `files-ingest-download` dir with --fast startegy
set -e
chore: refactor ingest tests (#814) - Adds reusable validation scripts (check-x.sh) to minimize repeated (or near-repeated) code and create one source of truth - Restructures the location of download and output folders such that they are nested in the test_unstructured_ingest directory - Adds gitignore for output folders / files to avoid them accidentally getting checked into the repository - Construct paths as reusable variables declared at top of scripts - Sort order of flag for ingest calls, across all tests (this makes it easier to parse at a glance) - OVERWRITE_FIXTURES removes all old fixtures for path to guarantee no stale results are left behind - Bonus: don't check/exit on expected number of expected outputs when OVERWRITE_FIXTURES is true - Bonus: exclude file_directory from Slack and Discord test scripts (match convention in all others)
2023-06-29 16:13:41 -07:00
SCRIPT_DIR=$(dirname "$(realpath "$0")")
Chore(ingest) : add tests on PDFs with fast strategy (#614) Summary * Updates "fast" PDF output element ordering to be consistent across Python versions by using the X,Y coordinates of elements extracted * Added PDFs ingest tests with fast strategy with new script ./test_unstructured_ingest/test-ingest-pdf-fast-reprocess.sh Updated ingest tests procedure: * Processing files with hi_res strategy, and preserve downloads to repo files-ingest-download/<ingest_test_name> * Reprocessing all PDFs with fast strategy from local file files-ingest-download, the partition outputs are stored at expected-structured-output/pdf-fast-reprocess/<ingest_test_name> Test * Reproduce tests with ./scripts/ingest-test-fixtures-update.sh , should expect no update. Also don't need any secret tokens since relevant tests won't produce PDFs.
2023-06-12 15:02:48 -04:00
cd "$SCRIPT_DIR"/.. || exit 1
chore: refactor ingest tests (#814) - Adds reusable validation scripts (check-x.sh) to minimize repeated (or near-repeated) code and create one source of truth - Restructures the location of download and output folders such that they are nested in the test_unstructured_ingest directory - Adds gitignore for output folders / files to avoid them accidentally getting checked into the repository - Construct paths as reusable variables declared at top of scripts - Sort order of flag for ingest calls, across all tests (this makes it easier to parse at a glance) - OVERWRITE_FIXTURES removes all old fixtures for path to guarantee no stale results are left behind - Bonus: don't check/exit on expected number of expected outputs when OVERWRITE_FIXTURES is true - Bonus: exclude file_directory from Slack and Discord test scripts (match convention in all others)
2023-06-29 16:13:41 -07:00
OUTPUT_FOLDER_NAME=pdf-fast-reprocess
OUTPUT_DIR=$SCRIPT_DIR/structured-output/$OUTPUT_FOLDER_NAME
INPUT_PATH=$SCRIPT_DIR/download
Chore(ingest) : add tests on PDFs with fast strategy (#614) Summary * Updates "fast" PDF output element ordering to be consistent across Python versions by using the X,Y coordinates of elements extracted * Added PDFs ingest tests with fast strategy with new script ./test_unstructured_ingest/test-ingest-pdf-fast-reprocess.sh Updated ingest tests procedure: * Processing files with hi_res strategy, and preserve downloads to repo files-ingest-download/<ingest_test_name> * Reprocessing all PDFs with fast strategy from local file files-ingest-download, the partition outputs are stored at expected-structured-output/pdf-fast-reprocess/<ingest_test_name> Test * Reproduce tests with ./scripts/ingest-test-fixtures-update.sh , should expect no update. Also don't need any secret tokens since relevant tests won't produce PDFs.
2023-06-12 15:02:48 -04:00
chore: refactor ingest tests (#814) - Adds reusable validation scripts (check-x.sh) to minimize repeated (or near-repeated) code and create one source of truth - Restructures the location of download and output folders such that they are nested in the test_unstructured_ingest directory - Adds gitignore for output folders / files to avoid them accidentally getting checked into the repository - Construct paths as reusable variables declared at top of scripts - Sort order of flag for ingest calls, across all tests (this makes it easier to parse at a glance) - OVERWRITE_FIXTURES removes all old fixtures for path to guarantee no stale results are left behind - Bonus: don't check/exit on expected number of expected outputs when OVERWRITE_FIXTURES is true - Bonus: exclude file_directory from Slack and Discord test scripts (match convention in all others)
2023-06-29 16:13:41 -07:00
echo "REPROCESS INPUT PATH"
ls "$INPUT_PATH"
Chore(ingest) : add tests on PDFs with fast strategy (#614) Summary * Updates "fast" PDF output element ordering to be consistent across Python versions by using the X,Y coordinates of elements extracted * Added PDFs ingest tests with fast strategy with new script ./test_unstructured_ingest/test-ingest-pdf-fast-reprocess.sh Updated ingest tests procedure: * Processing files with hi_res strategy, and preserve downloads to repo files-ingest-download/<ingest_test_name> * Reprocessing all PDFs with fast strategy from local file files-ingest-download, the partition outputs are stored at expected-structured-output/pdf-fast-reprocess/<ingest_test_name> Test * Reproduce tests with ./scripts/ingest-test-fixtures-update.sh , should expect no update. Also don't need any secret tokens since relevant tests won't produce PDFs.
2023-06-12 15:02:48 -04:00
PYTHONPATH=. ./unstructured/ingest/main.py \
Roman/ingest refactor (#978) * Pull out s3 code as subcommand * Pull out dropbox code as subcommand * Pull out azure code as subcommand * Pull out fsspec code as subcommand * Pull out github code as subcommand * Pull out gitlab code as subcommand * Pull out reddit code as subcommand * Pull out slack code as subcommand * Pull out discord code as subcommand * Pull out wikipedia code as subcommand * Pull out gdrive code as subcommand * Pull out biomed code as subcommand * rename parameters * Pull out onedrive code as subcommand * Pull out outlook code as subcommand * Pull out local code as subcommand * Pull out elasticsearch code as subcommand * Pull out confluence code as subcommand * Drop previous main file * update changelog * Add back in mp.Pool * Fix mypy issues with click * Make sure all tests run with verbose flag * refactor approach to dynamically add common options to each subcommand, scrub logging of options for sensitive data * Pull out some more shared options * Support running code via python as well as cli * update ingest readme and move it to the ingest folder * update usage in connector docs * move local command arg in test * Seperate out cli code from logic running unstructured * Make some cli fields required rather than optional * rename process -> processor * Improve logger to avoid duplicate handlers --------- Co-authored-by: Ryan Nikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
2023-07-31 13:20:10 -04:00
local \
Add Model Probabilities to Hi-Res strategy MetaData for Images + PDFs. (#1323) If a layout model is used from unstructured-inference, you get back class probabilities in the element metadata from partition. extra-pdf-image-in in requirements already has the newest version of unstructured-inference in there without a pinned version. Is there any place else that the unstructured-inference version needs to be updated to the required release version, 0.5.22?
2023-09-07 22:56:43 -04:00
--metadata-exclude coordinates,filename,file_directory,metadata.data_source.date_processed,metadata.last_modified,metadata.detection_class_prob \
chore: refactor ingest tests (#814) - Adds reusable validation scripts (check-x.sh) to minimize repeated (or near-repeated) code and create one source of truth - Restructures the location of download and output folders such that they are nested in the test_unstructured_ingest directory - Adds gitignore for output folders / files to avoid them accidentally getting checked into the repository - Construct paths as reusable variables declared at top of scripts - Sort order of flag for ingest calls, across all tests (this makes it easier to parse at a glance) - OVERWRITE_FIXTURES removes all old fixtures for path to guarantee no stale results are left behind - Bonus: don't check/exit on expected number of expected outputs when OVERWRITE_FIXTURES is true - Bonus: exclude file_directory from Slack and Discord test scripts (match convention in all others)
2023-06-29 16:13:41 -07:00
--num-processes 2 \
Roman/downstream connector cli subcommand (#1302) ### Description Update all other connectors to use the new downstream architecture that was recently introduced for the s3 connector. Closes #1313 and #1311
2023-09-11 11:40:56 -04:00
--strategy fast \
Chore(ingest) : add tests on PDFs with fast strategy (#614) Summary * Updates "fast" PDF output element ordering to be consistent across Python versions by using the X,Y coordinates of elements extracted * Added PDFs ingest tests with fast strategy with new script ./test_unstructured_ingest/test-ingest-pdf-fast-reprocess.sh Updated ingest tests procedure: * Processing files with hi_res strategy, and preserve downloads to repo files-ingest-download/<ingest_test_name> * Reprocessing all PDFs with fast strategy from local file files-ingest-download, the partition outputs are stored at expected-structured-output/pdf-fast-reprocess/<ingest_test_name> Test * Reproduce tests with ./scripts/ingest-test-fixtures-update.sh , should expect no update. Also don't need any secret tokens since relevant tests won't produce PDFs.
2023-06-12 15:02:48 -04:00
--reprocess \
Roman/downstream connector cli subcommand (#1302) ### Description Update all other connectors to use the new downstream architecture that was recently introduced for the s3 connector. Closes #1313 and #1311
2023-09-11 11:40:56 -04:00
--output-dir "$OUTPUT_DIR" \
Roman/ingest refactor (#978) * Pull out s3 code as subcommand * Pull out dropbox code as subcommand * Pull out azure code as subcommand * Pull out fsspec code as subcommand * Pull out github code as subcommand * Pull out gitlab code as subcommand * Pull out reddit code as subcommand * Pull out slack code as subcommand * Pull out discord code as subcommand * Pull out wikipedia code as subcommand * Pull out gdrive code as subcommand * Pull out biomed code as subcommand * rename parameters * Pull out onedrive code as subcommand * Pull out outlook code as subcommand * Pull out local code as subcommand * Pull out elasticsearch code as subcommand * Pull out confluence code as subcommand * Drop previous main file * update changelog * Add back in mp.Pool * Fix mypy issues with click * Make sure all tests run with verbose flag * refactor approach to dynamically add common options to each subcommand, scrub logging of options for sensitive data * Pull out some more shared options * Support running code via python as well as cli * update ingest readme and move it to the ingest folder * update usage in connector docs * move local command arg in test * Seperate out cli code from logic running unstructured * Make some cli fields required rather than optional * rename process -> processor * Improve logger to avoid duplicate handlers --------- Co-authored-by: Ryan Nikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
2023-07-31 13:20:10 -04:00
--verbose \
--file-glob "*.pdf" \
--input-path "$INPUT_PATH" \
--recursive
Chore(ingest) : add tests on PDFs with fast strategy (#614) Summary * Updates "fast" PDF output element ordering to be consistent across Python versions by using the X,Y coordinates of elements extracted * Added PDFs ingest tests with fast strategy with new script ./test_unstructured_ingest/test-ingest-pdf-fast-reprocess.sh Updated ingest tests procedure: * Processing files with hi_res strategy, and preserve downloads to repo files-ingest-download/<ingest_test_name> * Reprocessing all PDFs with fast strategy from local file files-ingest-download, the partition outputs are stored at expected-structured-output/pdf-fast-reprocess/<ingest_test_name> Test * Reproduce tests with ./scripts/ingest-test-fixtures-update.sh , should expect no update. Also don't need any secret tokens since relevant tests won't produce PDFs.
2023-06-12 15:02:48 -04:00
chore: refactor ingest tests (#814) - Adds reusable validation scripts (check-x.sh) to minimize repeated (or near-repeated) code and create one source of truth - Restructures the location of download and output folders such that they are nested in the test_unstructured_ingest directory - Adds gitignore for output folders / files to avoid them accidentally getting checked into the repository - Construct paths as reusable variables declared at top of scripts - Sort order of flag for ingest calls, across all tests (this makes it easier to parse at a glance) - OVERWRITE_FIXTURES removes all old fixtures for path to guarantee no stale results are left behind - Bonus: don't check/exit on expected number of expected outputs when OVERWRITE_FIXTURES is true - Bonus: exclude file_directory from Slack and Discord test scripts (match convention in all others)
2023-06-29 16:13:41 -07:00
sh "$SCRIPT_DIR"/check-diff-expected-output.sh $OUTPUT_FOLDER_NAME
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