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32 lines
1.5 KiB
Bash
32 lines
1.5 KiB
Bash
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#!/usr/bin/env bash
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SCRIPT_DIR=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
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cd "$SCRIPT_DIR"/.. || exit 1
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if [[ "$(find test_unstructured_ingest/expected-structured-output/biomed-ingest-output-api/ -type f -size +10k | wc -l)" != 2 ]]; then
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echo "The test fixtures in test_unstructured_ingest/expected-structured-output/biomed-ingest-output-api/ look suspicious. At least one of the files is too small."
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echo "Did you overwrite test fixtures with bad outputs?"
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exit 1
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fi
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PYTHONPATH=. ./unstructured/ingest/main.py \
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--biomed-api-from "2019-01-02" \
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--biomed-api-until "2019-01-02+00:03:10" \
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--structured-output-dir biomed-ingest-output-api \
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--num-processes 2 \
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--verbose \
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--download-dir biomed-download-api \
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--preserve-downloads
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if ! diff -ru biomed-ingest-output-api test_unstructured_ingest/expected-structured-output/biomed-ingest-output-api ; then
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echo
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echo "There are differences from the previously checked-in structured outputs."
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echo
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echo "If these differences are acceptable, copy the outputs from"
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echo "biomed-ingest-output-api/ to test_unstructured_ingest/expected-structured-output/biomed-ingest-output-api/ after running"
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echo
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echo "PYTHONPATH=. ./unstructured/ingest/main.py --biomed-api-from '2019-01-02' --biomed-api-until '2019-01-02+00:03:10' --structured-output-dir biomed-ingest-output-api --num-processes 2 --verbose --download-dir biomed-download-api --preserve-downloads"
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echo
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exit 1
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fi
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