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32 lines
1.5 KiB
Bash
32 lines
1.5 KiB
Bash
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#!/usr/bin/env bash
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SCRIPT_DIR=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
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cd "$SCRIPT_DIR"/.. || exit 1
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if [[ "$(find test_unstructured_ingest/expected-structured-output/biomed-ingest-output-path/ -type f -size +10k | wc -l)" != 1 ]]; then
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echo "The test fixtures in test_unstructured_ingest/expected-structured-output/biomed-ingest-output-path/ look suspicious. At least one of the files is too small."
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echo "Did you overwrite test fixtures with bad outputs?"
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exit 1
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fi
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PYTHONPATH=. ./unstructured/ingest/main.py \
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--biomed-path "oa_pdf/07/07/sbaa031.073.PMC7234218.pdf" \
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--structured-output-dir biomed-ingest-output-path \
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--num-processes 2 \
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--verbose \
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--download-dir biomed-download-path \
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--preserve-downloads
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if ! diff -ru biomed-ingest-output-path test_unstructured_ingest/expected-structured-output/biomed-ingest-output-path ; then
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echo
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echo "There are differences from the previously checked-in structured outputs."
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echo
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echo "If these differences are acceptable, copy the outputs from"
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echo "biomed-ingest-output-path/ to test_unstructured_ingest/expected-structured-output/biomed-ingest-output-path/ after running"
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echo
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echo "PYTHONPATH=. ./unstructured/ingest/main.py --biomed-path 'oa_pdf/07/07/sbaa031.073.PMC7234218.pdf' --structured-output-dir biomed-ingest-output-path --num-processes 2 --verbose --download-dir biomed-download-path --preserve-downloads"
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echo
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exit 1
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fi
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