### Description
Exposes the endpoint url as an access kwarg when using the s3 filesystem
library via the fsspec abstraction. This allows for any non-aws data
providers that support the s3 protocol to be used with the s3 connector
(i.e. minio)
Closes out https://github.com/Unstructured-IO/unstructured/issues/950
---------
Co-authored-by: ryannikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
Co-authored-by: rbiseck3 <rbiseck3@users.noreply.github.com>
- resolves an issue where occasionally deltalake writer results in
SIGABRT event though the writer finished writing table properly on linux
- this is first observed in ingest test
- Putting the writer into a process mitigates this problem by forcing
python to finish the deltalake rust backend to finish its tasks
## test
To test this it is best to setup an instance on a Linux system since the
problem has only been observed on Linux so far. Run
```bash
PYTHONPATH=. ./unstructured/ingest/main.py delta-table --num-processes 2 --metadata-exclude coordinates,filename,file_directory,metadata.data_source.date_processed,metadata.last_modified,metadata.date_created,metadata.detection_class_prob,metadata.parent_id,metadata.category_depth --table-uri ../tables/delta/ --preserve-downloads --verbose delta-table --write-column json_data --mode overwrite --table-uri file:///tmp/delta
```
Without this fix occasionally we'd encounter `SIGABTR`.
---------
Co-authored-by: ryannikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
This connector:
- takes a Jira Cloud URL, user email and api token; to authenticate into
Jira Cloud
- ingests:
- either all issues in all projects in a Jira Cloud Organization
- or
- issues in user specified projects, boards
- user specified issues
- processes this kind of data:
- text fields such as issue summary, description, and comments
- dropdown fields such as issue type, status, priority, assignee,
reporter, labels, and components
- other data such as issue id, issue key, project id, information on
subtasks
- notes down attachment URLs, however does not process attachments
- stores each downloaded issue in a txt file, in a predefined template
form (consisting of the data above)
- then processes each downloaded issue document into elements using
unstructured library
- related to: https://github.com/Unstructured-IO/unstructured/issues/263
To test the changes, make the necessary setups and run the relevant
ingest test scripts.
---------
Co-authored-by: ryannikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
Co-authored-by: ahmetmeleq <ahmetmeleq@users.noreply.github.com>
Uncomment confluence-diff ingest test to:
- see if the test has consistent results
- keep testing the confluence connector
---------
Co-authored-by: ryannikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
Co-authored-by: ahmetmeleq <ahmetmeleq@users.noreply.github.com>
### Description
Add delta table connector and test against a delta table generated via
delta.io and uploaded to s3. Shows an example of how to use the
connection options to leverage s3.
I was able to get this to work with s3 if I pass in the access and
secret keys as storage options. Even though the s3 bucket being used is
public, would not work without those.
---------
Co-authored-by: ryannikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
Co-authored-by: rbiseck3 <rbiseck3@users.noreply.github.com>
### Description
* Add ingest test for Notion docs
* Update default cache dir for connectors to include connector name.
Makes debugging the cached content easier.
---------
Co-authored-by: ryannikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
Co-authored-by: rbiseck3 <rbiseck3@users.noreply.github.com>
* add the first version of airtable connector
* change imports as inline to fail gracefully in case of lacking dependency
* parse tables as csv rather than plain text
* add relevant logic to be able to use --airtable-list-of-paths
* add script for creation of reseources for testing, add test script (large) for testing with a large number of tables to validate scroll functionality, update test script (diff) based on the new settings
* fix ingest test names
* add scripts for the large table test
* remove large table test from diff test
* make base and table ids explicit
* add and remove comments
* use -ne instead of !=
* update code based on the recent ingest refactor, update changelog and version
* shellcheck fix
* update comments
* update check-num-rows-and-columns-output error message
Co-authored-by: ryannikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
* update help comments
* update help comments
* update help comments
* update workflows to set auth tokens and to run make install
* add comments on create_scale_test_components
* separate component ids from the test script, add comments to document test component creation
* add LARGE_BASE test, implement LARGE_BASE component creation, replace component id
* shellcheck fixes
* shellcheck fixes
* update docs
* update comment
* bump version
* add wrongly deleted file
* sort columns before saving to process
* Update ingest test fixtures (#1098)
Co-authored-by: ahmetmeleq <ahmetmeleq@users.noreply.github.com>
---------
Co-authored-by: ryannikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
Co-authored-by: ahmetmeleq <ahmetmeleq@users.noreply.github.com>
* add param
* expected test
* add option (to do doc nit)
* test with api for now
* typo
* test with api key
* use local only
* encoding -> partition-encoding
* changelog and version
* Update ingest test fixtures (#1055)
Co-authored-by: yuming-long <yuming-long@users.noreply.github.com>
* ignore coordinates
* no witespace lol
* Update ingest test fixtures (#1061)
Co-authored-by: yuming-long <yuming-long@users.noreply.github.com>
---------
Co-authored-by: ryannikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
Co-authored-by: yuming-long <yuming-long@users.noreply.github.com>
* Add confluence connector and an example script
* add test script, add dependency installations
* add authentication secret variables for ci tests and actions
* add dependency installation commands for workflows
* add dependency installation commands for workflows
* Update ingest test fixtures (#907)
Co-authored-by: ahmetmeleq <ahmetmeleq@users.noreply.github.com>
* add add ingest test fixtures update workflow for python 3.10, update example script with dummy values
* change workflow name to avoid confusion
* change workflow name to avoid confusion
* only leave 3.8 in ingest test matrix to test consistent partitioning among python versions, remove 3.10 workflow for the test fixtures update
* only leave 3.8 in ingest test matrix to test consistent partitioning among python versions
* Update ingest test fixtures (#911)
Co-authored-by: ahmetmeleq <ahmetmeleq@users.noreply.github.com>
* revert back the test python version matrix
* recompile dependencies
* modifications for shellcheck
* update changelog and version
* changelog and version
* remove comments
* Update ingest test fixtures (#915)
Co-authored-by: ahmetmeleq <ahmetmeleq@users.noreply.github.com>
* add the option to state the number of spaces to be fetched
* add scroll functionality, expose --confluence-num-of-spaces, --confluence-list-of-spaces and --confluence-num-of-docs-from-each-space to users
* add help message
* add docstrings for two tests, validate grabbing every doc in the fetched spaces, count number of files instead of diffing for confluence2 test
* change test names
* rename connector arg
Co-authored-by: ryannikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
* change arg name for connector
Co-authored-by: ryannikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
* add comment to example
* change arg names
* add new tests to ingest test
* shellcheck remove redundant statement
* Update ingest test fixtures (#932)
Co-authored-by: ahmetmeleq <ahmetmeleq@users.noreply.github.com>
* Update ingest test fixtures (#936)
Co-authored-by: ahmetmeleq <ahmetmeleq@users.noreply.github.com>
* linting
* change file extensions to parse as html
* Update ingest test fixtures (#943)
Co-authored-by: ahmetmeleq <ahmetmeleq@users.noreply.github.com>
* remove old fixtures
* update version to 0.8.2-dev3
* change file to trigger CI
* change file to trigger CI
* change file to trigger CI
* change file to trigger CI
---------
Co-authored-by: ryannikolaidis <1208590+ryannikolaidis@users.noreply.github.com>
Co-authored-by: ahmetmeleq <ahmetmeleq@users.noreply.github.com>
Summary
* Updates "fast" PDF output element ordering to be consistent across Python versions by using the X,Y coordinates of elements extracted
* Added PDFs ingest tests with fast strategy with new script ./test_unstructured_ingest/test-ingest-pdf-fast-reprocess.sh
Updated ingest tests procedure:
* Processing files with hi_res strategy, and preserve downloads to repo files-ingest-download/<ingest_test_name>
* Reprocessing all PDFs with fast strategy from local file files-ingest-download, the partition outputs are stored at expected-structured-output/pdf-fast-reprocess/<ingest_test_name>
Test
* Reproduce tests with ./scripts/ingest-test-fixtures-update.sh , should expect no update. Also don't need any secret tokens since relevant tests won't produce PDFs.
* Initial commit of discord connector
based off of initial work by @tnachen with modifications
https://github.com/tnachen/unstructured/tree/tnachen/discord_connector
* Add test file
change format of imports
* working version of the connector
More work to be done to tidy it up and add any additional options
* add to test fixtures update
* fix spacing
* tests working, switching to bot testing channel
* add additional channel
add reprocess to tests
* add try clause to allow for exit on error
Update changelog and bump version
* add updated expected output filtes
* add logic to check if —discord-period is an integer
Add more to option description
* fix lint error
* Update discord reqs
* PR feedback
* add newline
* another newline
---------
Co-authored-by: Justin Bossert <packerbacker21@hotmail.com>
This connector takes a slack channel id, token and other options to
pull conversation history for a channel and store it as a text file that
is then processed by unstructured into expected output.
* Add --partition-by-api and --partition-host args to ingest
* Fix error in make check
* Bump changelog
* Add a test ingest script
Also add a workaround for the test causing 400s from our api. Seems we need to make sure
unstructured-api can handle getting a file.content_type of None.
* Remove the content type workaround
- Updates CI to install tesseract version 5.3.0 (better than 4.x in various ways incl. perf.).
- Adds azure expected output fixtures for more useful reference points and as a repro for Some PDF's with scanned images return empty elements #346 .
- Adds a script to regenerate ingest test fixtures that is run in an ubuntu docker container (like CI), with the same version of tesseract. See the comments in scripts/ingest-test-fixtures-update.sh for details.
- Updates expected outputs with above script.
- Updates individual test-ingest scripts to update expected .json output if OVERWRITE_FIXTURES=true.
* Add `AzureBlobStorageConnector` based on its `fsspec` implementation inheriting
from `FsspecConnector`
* Start deprecation life cycle for `unstructured-ingest --s3-url` option, to be deprecated in
favor of `--remote-url`.
---------
Co-authored-by: Tom Aarsen <37621491+tomaarsen@users.noreply.github.com>
Add GitLab data connector for ingest.
Involves more general Git functionality that is shared between the GitHub and GitLab data connectors.
Prevent code duplication for functionality between GitHub and GitLab ingest connectors.
Renamed github-access-token, github-branch and github-file-glob to git-access-token, git-branch and git-file-glob, respectively.
These work for GitHub and GitLab.
The connector can process a Wikipedia page
and output the HTML,
the plain text contents,
and the summary.
No API key required
Also add test case verifying that 3 files are indeed created (one for HTML, one for text, one for the summary).
- Creates ABC's for ingest connectors
- Updates the s3_connector classes to inherit from ABC's
- Moves s3 test script to it's own file to establish pattern for additional connectors
- Rewrites the Ingest.md doc, including instructions how how to add a connector
- Updates the example s3 ingest script to use the new location for main.py
Note that there were no logic changes, this is essentially a refactoring PR.
Test instructions:
Run ./test_unstructured_ingest/test-ingest.sh and ./examples/ingest/s3-small-batch/ingest.sh.
* Many command line options added. The sample ingest project is now an easy to use CLI (no code editing
necessary), capable of processing large numbers of files from S3 in a re-entrant manner. See Ingest.md.
* Fixes issue where text fixtures had been truncated
* Adds a check to make sure this doesn't happen again
* Moves fixture outputs for the existing connector one subdir lower,
to make room for future connector outputs.
