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https://github.com/Unstructured-IO/unstructured.git
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3158169585
### Summary Closes #3049. Reenables the MongoDB connector test, which was disabled previously in #3047 due to incompatibility between the `pymongo` and the `bson` package from `pip`, which is a dependency for the Astra connector. Per the `pymongo` docs below, `pymongo` ships with its own version of `bson` and installing `bson` from `pip` breaks `pymongo`. - https://pymongo.readthedocs.io/en/stable/installation.html ### Testing Ingest tests ran successfully for the [source connector](https://github.com/Unstructured-IO/unstructured/actions/runs/9273154676/job/25512636315) and the [destination connector](https://github.com/Unstructured-IO/unstructured/actions/runs/9273154676/job/25512635546).
76 lines
2.4 KiB
Bash
Executable File
76 lines
2.4 KiB
Bash
Executable File
#!/usr/bin/env bash
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set -e
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DEST_PATH=$(dirname "$(realpath "$0")")
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SCRIPT_DIR=$(dirname "$DEST_PATH")
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cd "$SCRIPT_DIR"/.. || exit 1
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OUTPUT_FOLDER_NAME=mongodb-dest
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OUTPUT_ROOT=${OUTPUT_ROOT:-$SCRIPT_DIR}
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OUTPUT_DIR=$OUTPUT_ROOT/structured-output/$OUTPUT_FOLDER_NAME
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WORK_DIR=$OUTPUT_ROOT/workdir/$OUTPUT_FOLDER_NAME
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max_processes=${MAX_PROCESSES:=$(python3 -c "import os; print(os.cpu_count())")}
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DESTINATION_MONGO_COLLECTION="utic-test-ingest-fixtures-output-$(uuidgen)"
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CI=${CI:-"false"}
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if [ -z "$MONGODB_URI" ] && [ -z "$MONGODB_DATABASE_NAME" ]; then
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echo "Skipping MongoDB destination ingest test because the MONGODB_URI and MONGODB_DATABASE_NAME env var are not set."
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exit 8
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fi
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# shellcheck disable=SC1091
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source "$SCRIPT_DIR"/cleanup.sh
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function cleanup() {
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cleanup_dir "$OUTPUT_DIR"
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cleanup_dir "$WORK_DIR"
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python "$SCRIPT_DIR"/python/test-ingest-mongodb.py \
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--uri "$MONGODB_URI" \
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--database "$MONGODB_DATABASE_NAME" \
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--collection "$DESTINATION_MONGO_COLLECTION" down
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}
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trap cleanup EXIT
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# NOTE(robinson) - per pymongo docs, pymongo ships with its own version of the bson library,
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# which is incompatible with the bson installed from pypi. bson is installed as part of the
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# astra dependencies.
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# ref: https://pymongo.readthedocs.io/en/stable/installation.html
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pip uninstall -y bson pymongo
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make install-ingest-mongodb
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python "$SCRIPT_DIR"/python/test-ingest-mongodb.py \
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--uri "$MONGODB_URI" \
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--database "$MONGODB_DATABASE_NAME" \
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--collection "$DESTINATION_MONGO_COLLECTION" up
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RUN_SCRIPT=${RUN_SCRIPT:-./unstructured/ingest/main.py}
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PYTHONPATH=${PYTHONPATH:-.} "$RUN_SCRIPT" \
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local \
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--num-processes "$max_processes" \
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--output-dir "$OUTPUT_DIR" \
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--strategy fast \
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--verbose \
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--reprocess \
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--input-path example-docs/fake-memo.pdf \
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--work-dir "$WORK_DIR" \
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--embedding-provider "langchain-huggingface" \
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mongodb \
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--uri "$MONGODB_URI" \
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--database "$MONGODB_DATABASE_NAME" \
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--collection "$DESTINATION_MONGO_COLLECTION"
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python "$SCRIPT_DIR"/python/test-ingest-mongodb.py \
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--uri "$MONGODB_URI" \
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--database "$MONGODB_DATABASE_NAME" \
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--collection "$DESTINATION_MONGO_COLLECTION" \
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check --expected-records 5
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python "$SCRIPT_DIR"/python/test-ingest-mongodb.py \
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--uri "$MONGODB_URI" \
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--database "$MONGODB_DATABASE_NAME" \
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--collection "$DESTINATION_MONGO_COLLECTION" \
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check-vector \
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--output-json "$OUTPUT_ROOT"/structured-output/$OUTPUT_FOLDER_NAME/fake-memo.pdf.json
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