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https://github.com/Unstructured-IO/unstructured.git
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d7608014c0
### Summary Closes #2959. Updates the dependency and CI to add support for Python 3.12. The MongoDB ingest tests were disabled due to jobs like [this one](https://github.com/Unstructured-IO/unstructured/actions/runs/9133383127/job/25116767333) failing due to issues with the `bson` package. `bson` is a dependency for the AstraDB connector, but `pymongo` does not work when `bson` is installed from `pip`. This issue is documented by MongoDB [here](https://pymongo.readthedocs.io/en/stable/installation.html). Spun off #3049 to resolve this. Issue seems unrelated to Python 3.12, though unsure why this didn't surface previously. Disables the `argilla` tests because `argilla` does not yet support Python 3.12. We can add the `argilla` tests back in once the PR references below is merged. You can still use the `stage_for_argilla` function if you're on `python<3.12` and you install `argilla` yourself. - https://github.com/argilla-io/argilla/pull/4837 --------- Co-authored-by: Nicolò Boschi <boschi1997@gmail.com>
136 lines
3.7 KiB
Bash
Executable File
136 lines
3.7 KiB
Bash
Executable File
#!/usr/bin/env bash
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set -u -o pipefail
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SCRIPT_DIR=$(cd -- "$(dirname -- "${BASH_SOURCE[0]}")" &>/dev/null && pwd)
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SKIPPED_FILES_LOG=$SCRIPT_DIR/skipped-files.txt
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# If the file already exists, reset it
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if [ -f "$SKIPPED_FILES_LOG" ]; then
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rm "$SKIPPED_FILES_LOG"
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fi
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touch "$SKIPPED_FILES_LOG"
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cd "$SCRIPT_DIR"/.. || exit 1
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EVAL_OUTPUT_ROOT=${EVAL_OUTPUT_ROOT:-$SCRIPT_DIR}
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# NOTE(crag): sets number of tesseract threads to 1 which may help with more reproducible outputs
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export OMP_THREAD_LIMIT=1
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all_tests=(
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's3.sh'
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's3-minio.sh'
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'azure.sh'
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'biomed-api.sh'
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'biomed-path.sh'
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# NOTE(yuming): The pdf-fast-reprocess test should be put after any tests that save downloaded files
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'pdf-fast-reprocess.sh'
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'salesforce.sh'
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'box.sh'
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'discord.sh'
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'dropbox.sh'
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'github.sh'
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'gitlab.sh'
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'google-drive.sh'
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'wikipedia.sh'
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'local.sh'
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'slack.sh'
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'against-api.sh'
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'gcs.sh'
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'onedrive.sh'
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'outlook.sh'
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'elasticsearch.sh'
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'confluence-diff.sh'
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'confluence-large.sh'
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'airtable-diff.sh'
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# NOTE(ryan): This test is disabled because it is triggering too many requests to the API
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# 'airtable-large.sh'
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'local-single-file.sh'
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'local-single-file-basic-chunking.sh'
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'local-single-file-chunk-no-orig-elements.sh'
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'local-single-file-with-encoding.sh'
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'local-single-file-with-pdf-infer-table-structure.sh'
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'notion.sh'
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'delta-table.sh'
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'jira.sh'
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'sharepoint.sh'
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'sharepoint-with-permissions.sh'
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'hubspot.sh'
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'local-embed.sh'
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'local-embed-bedrock.sh'
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'local-embed-octoai.sh'
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'local-embed-vertexai.sh'
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'sftp.sh'
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'opensearch.sh'
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# NOTE(robinson) - mongo conflicts with astra because it ships with its
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# own version of bson, and installing bson from pip causes mongo to fail
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# ref: https://pymongo.readthedocs.io/en/stable/installation.html
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# 'mongodb.sh'
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)
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full_python_matrix_tests=(
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'sharepoint.sh'
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'local.sh'
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'local-single-file.sh'
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'local-single-file-with-encoding.sh'
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'local-single-file-with-pdf-infer-table-structure.sh'
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's3.sh'
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'google-drive.sh'
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'gcs.sh'
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'azure.sh'
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)
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CURRENT_TEST="none"
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function print_last_run() {
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if [ "$CURRENT_TEST" != "none" ]; then
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echo "Last ran script: $CURRENT_TEST"
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fi
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echo "######## SKIPPED TESTS: ########"
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cat "$SKIPPED_FILES_LOG"
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}
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trap print_last_run EXIT
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python_version=$(python --version 2>&1)
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tests_to_ignore=(
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'notion.sh'
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'dropbox.sh'
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)
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for test in "${all_tests[@]}"; do
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CURRENT_TEST="$test"
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# IF: python_version is not 3.10 (wildcarded to match any subminor version) AND the current test is not in full_python_matrix_tests
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# Note: to test we expand the full_python_matrix_tests array to a string and then regex match the current test
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if [[ "$python_version" != "Python 3.10"* ]] && [[ ! "${full_python_matrix_tests[*]}" =~ $test ]]; then
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echo "--------- SKIPPING SCRIPT $test ---------"
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continue
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fi
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echo "--------- RUNNING SCRIPT $test ---------"
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echo "Running ./test_unstructured_ingest/$test"
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./test_unstructured_ingest/src/"$test"
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rc=$?
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if [[ $rc -eq 8 ]]; then
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echo "$test (skipped due to missing env var)" | tee -a "$SKIPPED_FILES_LOG"
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elif [[ "${tests_to_ignore[*]}" =~ $test ]]; then
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echo "$test (skipped checking error code: $rc)" | tee -a "$SKIPPED_FILES_LOG"
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continue
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elif [[ $rc -ne 0 ]]; then
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exit $rc
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fi
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echo "--------- FINISHED SCRIPT $test ---------"
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done
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set +e
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all_eval=(
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'text-extraction'
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'element-type'
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)
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for eval in "${all_eval[@]}"; do
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CURRENT_TEST="evaluation-metrics.sh $eval"
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echo "--------- RUNNING SCRIPT evaluation-metrics.sh $eval ---------"
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./test_unstructured_ingest/evaluation-metrics.sh "$eval" "$EVAL_OUTPUT_ROOT"
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echo "--------- FINISHED SCRIPT evaluation-metrics.sh $eval ---------"
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done
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