David Potter cde11d1eb0
feat: Add sftp source connector (#2163)
Adds source connector for SFTP which uses fsspec and paramiko via
fsspec. Paramiko is the standard sftp package for python used in pysftp
etc...

```
--username foo \
--password bar \
--remote-url sftp://localhost:47474/upload/
```

Will only download a specifically requested file if it has an extension.
(i.e. `--remote-url sftp://localhost:47474/upload/bob.zip`) It will
treat any other remote_url as a folder path. This is intentional.

---------

Co-authored-by: potter-potter <david.potter@gmail.com>
2023-12-07 19:33:19 +00:00

124 lines
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#!/usr/bin/env bash
set -u -o pipefail
SCRIPT_DIR=$( cd -- "$( dirname -- "${BASH_SOURCE[0]}" )" &> /dev/null && pwd )
SKIPPED_FILES_LOG=$SCRIPT_DIR/skipped-files.txt
# If the file already exists, reset it
if [ -f "$SKIPPED_FILES_LOG" ]; then
rm "$SKIPPED_FILES_LOG"
fi
touch "$SKIPPED_FILES_LOG"
cd "$SCRIPT_DIR"/.. || exit 1
# NOTE(crag): sets number of tesseract threads to 1 which may help with more reproducible outputs
export OMP_THREAD_LIMIT=1
all_tests=(
's3.sh'
's3-minio.sh'
'azure.sh'
'biomed-api.sh'
'biomed-path.sh'
# NOTE(yuming): The pdf-fast-reprocess test should be put after any tests that save downloaded files
'pdf-fast-reprocess.sh'
'salesforce.sh'
'box.sh'
'discord.sh'
'dropbox.sh'
'github.sh'
'gitlab.sh'
'google-drive.sh'
'wikipedia.sh'
'local.sh'
'slack.sh'
'against-api.sh'
'gcs.sh'
'onedrive.sh'
'outlook.sh'
'elasticsearch.sh'
'confluence-diff.sh'
'confluence-large.sh'
'airtable-diff.sh'
# NOTE(ryan): This test is disabled because it is triggering too many requests to the API
# 'airtable-large.sh'
'local-single-file.sh'
'local-single-file-with-encoding.sh'
'local-single-file-with-pdf-infer-table-structure.sh'
'notion.sh'
'delta-table.sh'
'jira.sh'
'sharepoint.sh'
'sharepoint-with-permissions.sh'
'hubspot.sh'
'local-embed.sh'
'sftp.sh'
)
full_python_matrix_tests=(
'sharepoint.sh'
'local.sh'
'local-single-file.sh'
'local-single-file-with-encoding.sh'
'local-single-file-with-pdf-infer-table-structure.sh'
's3.sh'
'google-drive.sh'
'gcs.sh'
'azure.sh'
)
CURRENT_TEST="none"
function print_last_run() {
if [ "$CURRENT_TEST" != "none" ]; then
echo "Last ran script: $CURRENT_TEST"
fi
echo "######## SKIPPED TESTS: ########"
cat "$SKIPPED_FILES_LOG"
}
trap print_last_run EXIT
python_version=$(python --version 2>&1)
tests_to_ignore=(
'notion.sh'
'dropbox.sh'
)
for test in "${all_tests[@]}"; do
CURRENT_TEST="$test"
# IF: python_version is not 3.10 (wildcarded to match any subminor version) AND the current test is not in full_python_matrix_tests
# Note: to test we expand the full_python_matrix_tests array to a string and then regex match the current test
if [[ "$python_version" != "Python 3.10"* ]] && [[ ! "${full_python_matrix_tests[*]}" =~ $test ]] ; then
echo "--------- SKIPPING SCRIPT $test ---------"
continue
fi
echo "--------- RUNNING SCRIPT $test ---------"
echo "Running ./test_unstructured_ingest/$test"
./test_unstructured_ingest/src/"$test"
rc=$?
if [[ $rc -eq 8 ]]; then
echo "$test (skipped due to missing env var)" | tee -a "$SKIPPED_FILES_LOG"
elif [[ "${tests_to_ignore[*]}" =~ $test ]]; then
echo "$test (skipped checking error code: $rc)" | tee -a "$SKIPPED_FILES_LOG"
continue
elif [[ $rc -ne 0 ]]; then
exit $rc
fi
echo "--------- FINISHED SCRIPT $test ---------"
done
set +e
all_eval=(
'text-extraction'
'element-type'
)
for eval in "${all_eval[@]}"; do
CURRENT_TEST="evaluation-metrics.sh $eval"
echo "--------- RUNNING SCRIPT evaluation-metrics.sh $eval ---------"
./test_unstructured_ingest/evaluation-metrics.sh "$eval"
echo "--------- FINISHED SCRIPT evaluation-metrics.sh $eval ---------"
done