Benjamin Torres e0201e9a11
feat/add sources from unstructured inference (#1538)
This PR adds support for `source` property from
`unstructured_inference`, allowing the user to be able to see the origin
of the data under `detection_origin`field environment variable
UNSTRUCTURED_INCLUDE_DEBUG_METADATA=true

In order to try this feature you can use this code:
```
from unstructured.partition.pdf import partition_pdf_or_image

yolox_elements = partition_pdf_or_image(filename='example-docs/loremipsum-flat.pdf', strategy='hi_res', model_name='yolox')

sources = [e.detection_origin for e in yolox_elements]
print(sources)
```
And will print 'yolox' as source for all the elements
2023-10-05 20:26:47 +00:00

299 lines
9.8 KiB
Python

import os
import pathlib
import msg_parser
import pytest
from unstructured.chunking.title import chunk_by_title
from unstructured.documents.elements import (
ElementMetadata,
ListItem,
NarrativeText,
Title,
)
from unstructured.partition.json import partition_json
from unstructured.partition.msg import extract_msg_attachment_info, partition_msg
from unstructured.partition.text import partition_text
from unstructured.partition.utils.constants import UNSTRUCTURED_INCLUDE_DEBUG_METADATA
from unstructured.staging.base import elements_to_json
DIRECTORY = pathlib.Path(__file__).parent.resolve()
EXAMPLE_DOCS_DIRECTORY = os.path.join(DIRECTORY, "..", "..", "..", "example-docs")
EXPECTED_MSG_OUTPUT = [
NarrativeText(text="This is a test email to use for unit tests."),
Title(text="Important points:"),
ListItem(text="Roses are red"),
ListItem(text="Violets are blue"),
]
ATTACH_EXPECTED_OUTPUT = [
{
"filename": "fake-attachment.txt",
"extension": ".txt",
"file_size": "unknown",
"payload": b"Hey this is a fake attachment!",
},
]
def test_partition_msg_from_filename():
filename = os.path.join(EXAMPLE_DOCS_DIRECTORY, "fake-email.msg")
elements = partition_msg(filename=filename)
parent_id = elements[0].metadata.parent_id
assert elements == EXPECTED_MSG_OUTPUT
assert (
elements[0].metadata.to_dict()
== ElementMetadata(
coordinates=None,
filename=filename,
last_modified="2022-12-16T17:04:16-05:00",
page_number=None,
url=None,
sent_from=["Matthew Robinson <mrobinson@unstructured.io>"],
sent_to=["Matthew Robinson (None)"],
subject="Test Email",
filetype="application/vnd.ms-outlook",
parent_id=parent_id,
).to_dict()
)
for element in elements:
assert element.metadata.filename == "fake-email.msg"
if UNSTRUCTURED_INCLUDE_DEBUG_METADATA:
assert {element.metadata.detection_origin for element in elements} == {"msg"}
def test_partition_msg_from_filename_returns_uns_elements():
filename = os.path.join(EXAMPLE_DOCS_DIRECTORY, "fake-email.msg")
elements = partition_msg(filename=filename)
assert isinstance(elements[0], NarrativeText)
def test_partition_msg_from_filename_with_metadata_filename():
filename = os.path.join(EXAMPLE_DOCS_DIRECTORY, "fake-email.msg")
elements = partition_msg(filename=filename, metadata_filename="test")
assert all(element.metadata.filename == "test" for element in elements)
class MockMsOxMessage:
def __init__(self, filename):
self.body = "Here is an email with plain text."
self.header_dict = {"Content-Type": "text/plain"}
def test_partition_msg_from_filename_with_text_content(monkeypatch):
monkeypatch.setattr(msg_parser, "MsOxMessage", MockMsOxMessage)
filename = os.path.join(EXAMPLE_DOCS_DIRECTORY, "fake-email.msg")
elements = partition_msg(filename=filename)
assert str(elements[0]) == "Here is an email with plain text."
assert elements[0].metadata.filename == "fake-email.msg"
assert elements[0].metadata.file_directory == EXAMPLE_DOCS_DIRECTORY
def test_partition_msg_raises_with_missing_file():
filename = os.path.join(EXAMPLE_DOCS_DIRECTORY, "doesnt-exist.msg")
with pytest.raises(FileNotFoundError):
partition_msg(filename=filename)
def test_partition_msg_from_file():
filename = os.path.join(EXAMPLE_DOCS_DIRECTORY, "fake-email.msg")
with open(filename, "rb") as f:
elements = partition_msg(file=f)
assert elements == EXPECTED_MSG_OUTPUT
for element in elements:
assert element.metadata.filename is None
def test_partition_msg_from_file_with_metadata_filename():
filename = os.path.join(EXAMPLE_DOCS_DIRECTORY, "fake-email.msg")
with open(filename, "rb") as f:
elements = partition_msg(file=f, metadata_filename="test")
assert elements == EXPECTED_MSG_OUTPUT
for element in elements:
assert element.metadata.filename == "test"
def test_extract_attachment_info():
filename = os.path.join(
DIRECTORY,
"..",
"..",
"..",
"example-docs",
"fake-email-attachment.msg",
)
attachment_info = extract_msg_attachment_info(filename)
assert len(attachment_info) > 0
assert attachment_info == ATTACH_EXPECTED_OUTPUT
def test_partition_msg_raises_with_both_specified():
filename = os.path.join(EXAMPLE_DOCS_DIRECTORY, "fake-email.msg")
with open(filename, "rb") as f, pytest.raises(ValueError):
partition_msg(filename=filename, file=f)
def test_partition_msg_raises_with_neither():
with pytest.raises(ValueError):
partition_msg()
def test_partition_msg_from_filename_exclude_metadata():
filename = os.path.join(EXAMPLE_DOCS_DIRECTORY, "fake-email.msg")
elements = partition_msg(filename=filename, include_metadata=False)
for i in range(len(elements)):
assert elements[i].metadata.to_dict() == {}
def test_partition_msg_from_file_exclude_metadata():
filename = os.path.join(EXAMPLE_DOCS_DIRECTORY, "fake-email.msg")
with open(filename, "rb") as f:
elements = partition_msg(file=f, include_metadata=False)
for i in range(len(elements)):
assert elements[i].metadata.to_dict() == {}
def test_partition_msg_can_process_attachments(
tmpdir,
filename="example-docs/fake-email-attachment.msg",
):
extract_msg_attachment_info(filename=filename, output_dir=tmpdir.dirname)
attachment_filename = os.path.join(
tmpdir.dirname,
ATTACH_EXPECTED_OUTPUT[0]["filename"],
)
mocked_last_modification_date = "2029-07-05T09:24:28"
attachment_elements = partition_text(
filename=attachment_filename,
metadata_filename=attachment_filename,
metadata_last_modified=mocked_last_modification_date,
)
expected_metadata = attachment_elements[0].metadata
expected_metadata.file_directory = None
expected_metadata.attached_to_filename = filename
elements = partition_msg(
filename=filename,
attachment_partitioner=partition_text,
process_attachments=True,
metadata_last_modified=mocked_last_modification_date,
)
# This test does not need to validate if hierarchy is working
# Patch to nullify parent_id
expected_metadata.parent_id = None
elements[-1].metadata.parent_id = None
assert elements[0].text.startswith("Hello!")
for element in elements[:-1]:
assert element.metadata.filename == "fake-email-attachment.msg"
assert element.metadata.subject == "Fake email with attachment"
assert elements[-1].text == "Hey this is a fake attachment!"
assert elements[-1].metadata == expected_metadata
def test_partition_msg_can_process_min_max_wtih_attachments(
tmpdir,
filename="example-docs/fake-email-attachment.msg",
):
extract_msg_attachment_info(filename=filename, output_dir=tmpdir.dirname)
attachment_filename = os.path.join(
tmpdir.dirname,
ATTACH_EXPECTED_OUTPUT[0]["filename"],
)
attachment_elements = partition_text(
filename=attachment_filename,
metadata_filename=attachment_filename,
min_partition=6,
max_partition=12,
)
elements = partition_msg(
filename=filename,
attachment_partitioner=partition_text,
process_attachments=True,
min_partition=6,
max_partition=12,
)
assert elements[0].text.startswith("Hello!")
assert elements[-1].text == attachment_elements[-1].text
assert elements[-2].text == attachment_elements[-2].text
for element in elements:
if element.metadata.attached_to_filename is not None:
assert len(element.text) <= 12
assert len(element.text) >= 6
def test_partition_msg_raises_with_no_partitioner(
filename="example-docs/fake-email-attachment.msg",
):
with pytest.raises(ValueError):
partition_msg(filename=filename, process_attachments=True)
def test_partition_msg_from_file_custom_metadata_date(
filename="example-docs/fake-email.msg",
):
expected_last_modification_date = "2020-07-05T09:24:28"
with open(filename, "rb") as f:
elements = partition_msg(
file=f,
metadata_last_modified=expected_last_modification_date,
)
assert elements[0].metadata.last_modified == expected_last_modification_date
def test_partition_msg_custom_metadata_date(
filename="example-docs/fake-email.msg",
):
expected_last_modification_date = "2020-07-05T09:24:28"
elements = partition_msg(
filename=filename,
metadata_last_modified=expected_last_modification_date,
)
assert elements[0].metadata.last_modified == expected_last_modification_date
def test_partition_msg_with_json():
filename = os.path.join(EXAMPLE_DOCS_DIRECTORY, "fake-email.msg")
elements = partition_msg(filename=filename)
test_elements = partition_json(text=elements_to_json(elements))
assert elements == test_elements
assert elements[0].metadata.sent_from == test_elements[0].metadata.sent_from
assert elements[0].metadata.sent_to[0] == test_elements[0].metadata.sent_to[0]
assert elements[0].metadata.subject == test_elements[0].metadata.subject
def test_partition_msg_with_pgp_encrypted_message(
caplog,
filename="example-docs/fake-encrypted.msg",
):
elements = partition_msg(filename=filename)
assert elements == []
assert "WARNING" in caplog.text
assert "Encrypted email detected" in caplog.text
def test_add_chunking_strategy_by_title_on_partition_msg(
filename=os.path.join(EXAMPLE_DOCS_DIRECTORY, "fake-email.msg"),
):
elements = partition_msg(filename=filename)
chunk_elements = partition_msg(filename, chunking_strategy="by_title")
chunks = chunk_by_title(elements)
assert chunk_elements != elements
assert chunk_elements == chunks